Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4677 ATGGTTGATCAGCACCCTACAATCATGGAGAAGGTCACTGGCCAGATCCATCGTCGATCTGGTGTCTCATCGGGTTATGGTGGAAGCTTCCGTCAACCTGCAATGTTCCAAAAATACTCCTATGGGAATTACTCAAACGCTGCATTGGCACCTGCATGCAGGACAACTGTTGATTTATCTTCAGTTGCTACCAATGCTTCTCCTATGTTTGTTGCTGCTCCAGCGGAAAAGAGCCATTTTCTTATTGACTTTCTCATGGGTGGTGTTTCAGCTGCAGTTTCAAAAACTGCTGCTGCTCCCATCGAGCGTGTTAAGCTTTTGATCCAAAACCAGGATGAGATGATCAAGGCTGGTAGGCTTTCTGAGCCATACAAGGGCATTGGTGATTGTTTTAAAAGAACAACTGCCGATGAGGGTTTGGTTGCTCTATGGAGAGGAAACACTGCCAATGTCATTCGTTATTTCCCCACTCAGGCATTGAATTTTGCATTCAAAGATTACTTCAAGAGGCTTTTCAACTTCAAGAAGGACAGAGATGGTTACTGGAAGTGGTTTGCTGGCAACTTGGCATCCGGAGGTGCTGCTGGTGCCTCATCCCTCTTGTTTGTTTACTCACTCGACTATGCCCGTACCCGTCTTGCCAATGATTCTAAGGCAGCTAAGAAGGGTGGAGAAAGACAATTCAATGGTCTTGTCGATGTCTACAAGAAGACCCTCGCAACTGATGGAGTTGCTGGGCTTTACCGTGGTTTCAACATCTCCTGTGTTGGAATCATTGTGTACCGTGGTCTCTACTTTGGAATGTACGATTCCCTCAAACCAGTTCTTCTGACTGGAAAATTGCAGGATAGCTTTTTCGCCAGTTTTGGACTCGGATGGCTCATCACCAATGGTGCTGGTCTAGCCTCATACCCAATTGACACAGTTAGGAGAAGAATGATGATGACATCAGGAGAAGCTGTCAAGTACAAGAGTTCCTTGGATGCATTCCAACAAATCCTGAAGAACGAGGGAGCTAAGTCATTGTTCAAGGGAGCTGGTGCTAACATCCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCTGGTTATGACAAGTTGCAGGTTCTTGTTTTCGGCAAGAAATATGGATCTGGTGGAGCTTAA 1143 0.4628 MVDQHPTIMEKVTGQIHRRSGVSSGYGGSFRQPAMFQKYSYGNYSNAALAPACRTTVDLSSVATNASPMFVAAPAEKSHFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTTADEGLVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDSKAAKKGGERQFNGLVDVYKKTLATDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFQQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4677 380 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 4 380 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4677 380 Gene3D Mitochondrial carrier domain 81 376 IPR023395 -
Psa5g4677 380 PRINTS Adenine nucleotide translocator signature 80 92 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4677 380 PRINTS Adenine nucleotide translocator signature 124 145 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4677 380 PRINTS Adenine nucleotide translocator signature 157 169 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4677 380 PRINTS Adenine nucleotide translocator signature 183 196 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4677 380 PRINTS Adenine nucleotide translocator signature 288 304 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Psa5g4677 380 PRINTS Mitochondrial carrier protein signature 83 96 IPR002067 GO:0055085
Psa5g4677 380 PRINTS Mitochondrial carrier protein signature 96 110 IPR002067 GO:0055085
Psa5g4677 380 PRINTS Mitochondrial carrier protein signature 146 166 IPR002067 GO:0055085
Psa5g4677 380 PRINTS Mitochondrial carrier protein signature 198 216 IPR002067 GO:0055085
Psa5g4677 380 PRINTS Mitochondrial carrier protein signature 248 266 IPR002067 GO:0055085
Psa5g4677 380 PRINTS Mitochondrial carrier protein signature 292 314 IPR002067 GO:0055085
Psa5g4677 380 SUPERFAMILY Mitochondrial carrier 78 365 IPR023395 -
Psa5g4677 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 275 IPR018108 -
Psa5g4677 380 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 4 380 - -
Psa5g4677 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 283 369 IPR018108 -
Psa5g4677 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 171 IPR018108 -
Psa5g4677 380 Pfam Mitochondrial carrier protein 78 175 IPR018108 -
Psa5g4677 380 Pfam Mitochondrial carrier protein 182 278 IPR018108 -
Psa5g4677 380 Pfam Mitochondrial carrier protein 284 371 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4677 Psa-Chr5 415677866 415681991 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4677 4 380 Antiporters AT5G13490 81.250 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4677 K05863 - gmx:100789942 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4677 5 415677866 415681991 Psa5g4677 5 415677866 415681991 ECH