Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4647 ATGGCTGCAAAGTTGCTGCATTCTTTAGCAGATGATAATCAAGATCTGCAGAAGCAGATTGGTTGTATGACTGGAATTTTTCAACTTTTCGATCGGCATCAGATACTCACGGCTCGCCAGAAGAGACTTCCTTCTGGTAATTTGCATTTCAGCGATGGAAGCTTGGAAAGAGATTCTGATAGCAATCATAGTCTACAACATCGACAAATCCCAAACGATACGAGCTTAAACACAGGTCTGAATGAAAAGCGAAGAATTTCGACAGAATCATCGAGAGCATCATTCTCGTCTTGTTCATCATCGTTGTCTTCTTTGGACTTTAAGGCTGAAGTTGAGACTTCCTTTGAAACTCCTTCGAGGGACACATTTATGAACCAACCGTCTATCTCTCCCCGTTTCGGACGTCACTCACTTGACCTACGTGATGTCGTGAAGGATTCAATGTATAGGGATCCTCGAGGGCTATCGTCAAAATCTACATCCAAAGAGCAATCTTCTGTTCATGCCATGAAGCATAGGGATTCCCCGCGACCTTTTCAGCAGTCAAAATATGTTGATAGATCTTACGGAGTTGAAATAGACGAGAAGCAAAGTGTGCCTATTGATCTAAAGGAGTCGATCCGAGTCCTTTCGAAACTTCGAGAAGCACCTTGGCACTATGGAGATACTACTAGAGAACTTCCGAGATCGTCGTATGAAGTAAAAGATGGACACTGGAATTCCGTCTCAAAGGATGCTCCTTGGTTGGCTTATGATGGAAGAGAAATGAGCCGTTTATCTTTTGAATCGCGGGAGACGATCAAATCCACACCAAAGCTAAAAGAATTTCCTCGGCATTCACTGGATAGTAAGGAAGGTTCGTGGCGCACTTATAACTCTGATTCGAAGCCTAACCACGGCTCAAGAAACGTTTACGGCGCCACTTCCACCTCCAATGAAAAATTCTCTAGTCCACAACAGTCTTCATCAATGCAAAATCGGCTACCGAGTGTTGTTGCAAAACTGATGGGCTTGGAAGCATTACCTGATTCCTCTTCGGTAAGCGATACTCAGTCAGGTTCAACTGAAACTTACTTAGCTCAAGGTATCGGTCAGATTCCAAGATCATCGAAAAATGGATTCATAAAACCGCTCCGAGTTTCCAACTCGCCAAAAATGTCATCGAAAGATCCAACTTCGCCAAGGCGGAAAAATCCTGACGTGGTTATGAGACCAGTCTCTAGTTCAAAGTTTCCGATTGAACCAGCACCTTGGAAGCAACATGATGCAAATAGAAACTCTCAGAAGCCAAATTTAAGGACAACGAAAGCTCAAGCGAGAACACCGGAATCATTTCCTTCGGTTTATAGTGAGATAGAGAAGAGATTGAAGGACCTCGAATTCAAACAATCGGGAAGAGATCTTAGAGCACTAAAGCAGATACTAGAAGCAATGCAAGAAAAGGGACTGTTAGAGAGCCGAAAAGACGAACAAGTTCCAAATGTAAATGGAAGTCGAGGTGACTATGAACCGAAAGCTGCCAATCTAAATCAAAATTCAAGGTCGGGAAAGCAACAAAATCATCAGAGAAACAATTTTCTATCATCTACAATCAAGGGAAGTGACTCAGCAAGAGCTTTTGATTCTCCGATAGTGATAATGAAACCGGCAAAACTTGTTGAGAAATCCGAGATTTCGGCTTCTTCAGCTATTCCAATCGGTGGTTTTTCTGCTTCGCATAATAGAAACAACATATCTTCTACTCTAAAAGACCAGTCTCCGAAGAATATTCGCAGGGATGCTTCTCCGAGTTCCACCGAAAAGAAAACAAGCATTACCAAGACTACTAGATCATCGCAATCTCAATCAAGGTCTCAACAATTCCCAAAAGAAAATAACCAAAGTCCAGTGAAGAATTCAGGTTCTGTGAGTCCAAGATTGCAGCAGAAGAAGCTGGATTTAGAGAAGCGATCTCGTATACCTACTTCACCATCCGATGCAAACAAATCAAGAAGACAATCTGGTAAAAAGGTAGCAGAATCAGTTTCCCCTGGTGGAAAAGTACGACACAAAGACAAAGTCGTTAACTCACAGCATAGCGAAGAGCAAATGAGTGAATTAAGCAATGATTCTCGAAATTTTTACCAAGGGGATGAAATTTCTCTTCCATCAGATGGTGTGACCGTCGACTCGAAATTGGATATTGAAGTCACTAGTAGTTTACGGACTAACATAACCGATGGCAGCCAGAGTCCGTCCTTGAAAGCGATGAAGCAATTGGTTTCAGAAACAGTTCAGAAAAAATCAACTCCAAGGTTGGATGAAGATGATACAACTCAGGAACTTGCAACAAAGGCCCTGGAACATCCAAGTCCTATCTCGGTTCTCGACGGATCTGTGTACACAGACGACGTGGCATCGCCAGCAATGCAGACACCTAAAGATCCACAAGTTGGTAATGATCAAGAATCCAAAGACAATGAGGTCAAAGATCAATGGAAGCCCGATGATGGCCTTTCATTCAACAGCACAGGATCCGGGGAGATCAATCGCAAGAAATTACAAAGCATAGATCATCTTGTTCAGAAGCTTAGACGGCTAAACTCAAGTCACGACGAAGCTAGAAACGATTACATTGCTTCACTATGCGAAAACTCAAATCCAGACCACCGATACATATCTGAAATACTACTAGCCTCAGGTCTCTTACTCAGAGACCTGAGTTCCGAATTCCTGACATTTCAACTACACTCGTCGGGTCATCCTATCAACCCGGAGTTATTCCTTGTCTTGGAACAAACCAAAGCAAGTAGTTTGCTTTCAAAAGAAGAAACCACCACCTTCGAAAAATCCGCCTTCTCAAAGCAAAACACCGAGAAATTCCACCGAAAACTCATCTTTGACTCCGTGAACGAAATCCTCGGTGCAAAACTAGGCTATTCTTCCGAACCATGGTTTCAACCCAACAAACTCACAAAGAAAAACCTTAGCTCTCAAAAGCTTCTCAAAGAACTATGCTTCGAGATAGAAAAAGTCCAAGCCAAGAAAACTGAAACCTGCCTAGAAGACGACGAAGAGGACGACGGTCTAAAGAGTTTGTTGTGTGAAGATGTGATTCATGGATCAGAATGTTGGGAAAATTTCAATGGTGAAATACCTGGAGTTGTGTTGGATGTTGAGAGATTGATATTCAAGGATTTGGTGAATGATATTGTGATTGGTGAAGCTGCTGGTTTGCGAGTCAAGTCGTCGGTTCGACGCAGGAGACTGTTTGGAAAGTAG 3261 0.4266 MAAKLLHSLADDNQDLQKQIGCMTGIFQLFDRHQILTARQKRLPSGNLHFSDGSLERDSDSNHSLQHRQIPNDTSLNTGLNEKRRISTESSRASFSSCSSSLSSLDFKAEVETSFETPSRDTFMNQPSISPRFGRHSLDLRDVVKDSMYRDPRGLSSKSTSKEQSSVHAMKHRDSPRPFQQSKYVDRSYGVEIDEKQSVPIDLKESIRVLSKLREAPWHYGDTTRELPRSSYEVKDGHWNSVSKDAPWLAYDGREMSRLSFESRETIKSTPKLKEFPRHSLDSKEGSWRTYNSDSKPNHGSRNVYGATSTSNEKFSSPQQSSSMQNRLPSVVAKLMGLEALPDSSSVSDTQSGSTETYLAQGIGQIPRSSKNGFIKPLRVSNSPKMSSKDPTSPRRKNPDVVMRPVSSSKFPIEPAPWKQHDANRNSQKPNLRTTKAQARTPESFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKDEQVPNVNGSRGDYEPKAANLNQNSRSGKQQNHQRNNFLSSTIKGSDSARAFDSPIVIMKPAKLVEKSEISASSAIPIGGFSASHNRNNISSTLKDQSPKNIRRDASPSSTEKKTSITKTTRSSQSQSRSQQFPKENNQSPVKNSGSVSPRLQQKKLDLEKRSRIPTSPSDANKSRRQSGKKVAESVSPGGKVRHKDKVVNSQHSEEQMSELSNDSRNFYQGDEISLPSDGVTVDSKLDIEVTSSLRTNITDGSQSPSLKAMKQLVSETVQKKSTPRLDEDDTTQELATKALEHPSPISVLDGSVYTDDVASPAMQTPKDPQVGNDQESKDNEVKDQWKPDDGLSFNSTGSGEINRKKLQSIDHLVQKLRRLNSSHDEARNDYIASLCENSNPDHRYISEILLASGLLLRDLSSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEETTTFEKSAFSKQNTEKFHRKLIFDSVNEILGAKLGYSSEPWFQPNKLTKKNLSSQKLLKELCFEIEKVQAKKTETCLEDDEEDDGLKSLLCEDVIHGSECWENFNGEIPGVVLDVERLIFKDLVNDIVIGEAAGLRVKSSVRRRRLFGK* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4647 1086 MobiDBLite consensus disorder prediction 812 828 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 270 326 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 421 444 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 801 840 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 375 389 - -
Psa5g4647 1086 Coils Coil 850 870 - -
Psa5g4647 1086 Pfam Domain of unknown function (DUF4378) 882 1063 IPR025486 -
Psa5g4647 1086 PANTHER LONGIFOLIA PROTEIN 1 1084 IPR033334 GO:0051513
Psa5g4647 1086 MobiDBLite consensus disorder prediction 676 692 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 65 92 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 165 180 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 147 183 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 485 504 - -
Psa5g4647 1086 Pfam DUF761-associated sequence motif 316 346 IPR032795 -
Psa5g4647 1086 PANTHER LONGIFOLIA PROTEIN 1 1084 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 286 326 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 55 92 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 270 285 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 361 444 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 599 640 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 575 722 - -
Psa5g4647 1086 MobiDBLite consensus disorder prediction 693 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4647 Psa-Chr5 412395889 412401673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4647 133 1085 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 45.325 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4647 - - gmx:100787391 1446.03