Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4641 ATGGCTGCAACTATCATTGGAAGTGCTTTCCTCTCTGCAACTGTTCAGAACTTAGTTGAGAAACTTGCTTCCAAAGAGTTTCTTGATTACTTCAAAAAAACCAAGTTCGATGACTCACTCTTGGAACAGTTAGGACAAACACTACTCACTATTCAACCTGTGCTAGATGCTGCAGAGGAGAAGCAGATCAACACTCCTTCTGTCAAACAATGGCTTGATGGCTTGAAAGATGCTCTCTACGATGCTGAAGATCTGCTCAACCAAATTAGCTATGATTCCCTTCAATGCCAGATGGAGAACACGCAAGCTGCAAGCAAAACTAAACAGGTCTGGAACTTCTTTTTTTCTCCTTCTACAAATAACTATGAAGAGATCAATTCCCAAATGAAAAAAATGTGCTTAAACCTCAAACATTTTGCTGAAAATAAAGATATCATTAGTTTGCAAACTAAAAGTGTCGGAGTTTCTCGTAGAACACCTTCAACTCCTATGTTCAATGAATCTGTCATGGTTGGTAGGAAAGATGACAAAGACAAAGTAATGAACATGTTGCTATCACAAAGCAATACTAGCCAGAACAATATGGGCGTAGTTGCAATTGTAGGCATGGGAGGTGTCGGAAAAACAACACTTGCACAACTTGCTTACAATGATGAAAAAGTTGAACATCACTTTGATCTCAAAGCATGGGCTTGTGTATCGGAGGATTTTGATGTTTTTAGAGTAACCAAAGCTCTCCTTGAATCTGTCACTTCAAAAACATGGAATGACAGTAATCTTGATATTCTTCGAGTTGAGTTAAAGAAAAATTTGAGGGACAAAAGATTTTTCATTGTGTTGGATGACTTATGGAATGACAGTTATTCTGATTGGGATGAACTTGCATCTCCGAAGCAATTGGTTTTGTTGTGGATGGCAGAAGGCTTCCTTGATCATTCTCAAGACAGAAAAACCATGGAAGAAGTAGGTGATGAGTTTTTTGCTGAATTGTTATCCAGATCATTGATTCAACAATTGCATGATAATTATGGAAAACAAATATTTGTCATGCATGACCTTGTTAATGATTTAGCTACTGCTGTATCTGGAAGAAGTTGTTACAGACATGAATTTGGCGCTAAGAGCTATGAAAATGTTCGTCACTTGTCATATAATCAAGAAACATACGACGTTTTCAAGAAGTTTAAGACTTTCGACAAATTCAAACGCTTGAGAAGCTTCCTTGCCATTGGACTTGGATGGGCAGAATATAATTTATCAAGAAACGTGGTCAATTATTTGCTACCCACATTTGGAAGGTTGCGTGTGTTATCGTTGTCAAAATATAGAAACATCACCACGCTACCCGTTACAGTTGGCAATTTAGTGCAGTTGCGCTATCTAGATCTCTCTCGCACGAATATTGCAAGCTTGCCTGACACCATATGCAACCTCTACTACTTGCAAACCTTGATTTTATCTGAGTGCTCAAAACTCACAGAATTGCCAGAACATGTTGGTAAATTAATTAATTTGCGTCATCTTTATATTGATAGGACAAGCATAATAGAGATGCCGAAGCAAATTGCTGAACTAGAAAACCTTCAAACTCTAAATTTTTTTGTAGTAGGCAAGAAAAATATTGGTTCAACTGTTAGAGAGCTTGGGAAGTTTCCTAAGCTACGGGGAAAATTATTCATCAAGAACCTGCAGAATGTCATTGATGTCATGGAGGCAAGTGATACCAACTTGAAGAGCAAAGAACATATTGAGGAATTGAAGCTACAGTGGGGCAAGGAAACGGATGACACACTTAATGAAAGAAATGTGCTTGATATGTTACAACCATCTGCAAACCTTAAGATATTAAACATTGGCTTGTATGGTGGGACACATTTTCCTAGTTGGTTGGGAGATCCATCATTTTTTAACATGGTGTCCCTCTGTATTGATGAATGTGTGAATTGCACGACACTTCCACCACTAGGGCAGCTACCTTCTCTCAAGGACTTGCAAATTGGTAGCATGACAATTTTGGAGACAATTGGGCCGCAGTTCTATGGCATGGCAGCAGGAGGTTCCAATTCTTCGTTCCAACCATTTCAATCCCTTGAGAATTTGTTCTTTTTGCTCATGGAAAATTGGAAGGAATGGCATCCTTTTCCAGACAACATGTCTCCTTTTCCTCGTCTGAAAACTCTGAGGTTATTAAGTTGTCCCAAATTAAAGGGACATTTACCTACTCATCTTCCTTCCATAGAAGAGATTGATATAGATGGTTGCGACCATCTCTTGGCAACACCACCTACTCAACATTGGCTCTCCTCAATAAAAAATATTCGTATTAGGGAACATTCGAATTCAGAAAGCAATACTGAAAGGACCCAATACTCATTGCTCGAGAGTGATTCTCCATGTCTGCTGCAAACAATAGACATATCGAACTGTCATATGCTAAAATCTGTACCTAAAATGATTATAAACAGCACCTGTCTTCTATGCTTGGATCTCTATGGTATTAGTTCTCTCAATGCGTTTCCAACAAACGGTTTACCCACTTCTTTGCAATCACTTTGTATTTCAAAATGTGAGAATTTAACATTCCTACCTCCTGAAACGTGGAGCAATTACACATCACTTGTGACTCTTAAATTAAAAAACAGCTGCAGTGCACTTACTTCCTTCCCATTAAATTGTTTTCCTGTGCTCCAAGATCTTTCCATCAGGAAATGTAGGAGTTTGGAATCTATTTTTATTTCAGAAACTTCTTCTTGTAGCTCATCGACCCTCCGATCTTTTGTTGTCAATGATTGTGAGGCACTTAGATCACTACCTCAACGGATGGACACACTCACCGCTCTTGAATCGATAACTCTATGCATTCTTCCAAATTTGAATTTATCATTATGTGAAGGAGCTTTCCTACCTCCGAATTTACAAATAATTATTGTTTATTCTGTGAGGATAACAAAGCCGGTAACAGAGTGGGGTCTCCGAGGCCTTACTCGTGTTCGTTCAATGGATATCAGAGGTGATGACATTGTTAAGATGTTGCTCAAAGAGCCGCTGTTGCCCATTTCCCTTGTGTCTCTAAAATTCAAAAGTCTCTTTGAAATGAAATCCTTAGAAGCAAATGGACTTCGACACCTCTCCTCTCTAGATCGCATTTACTTTATTAATTGTACAGAGCTTGTGTCATTGTCAGAAAAAGCCTTTCCCTCCTCGCTGAAAACACTTTATTTCTGGAACTGTCCAAGACTAAACTCATTGCCAGAAAAAGCCTTTCCCTCCTCGCTGAAAACACTTCATTTCTGGAACTGTCCAGAACTAAACTCATTGTCAGAAAAAGTCTTTCCCTCCTCGCTGAAAACACTCATTTTCTGCGAGTGTCCAAGACTAGAGTCATTGCCAGAAGACAGCCTCCCTACCTTTCTTGAGGAACTGACCATTATAAGTTGTCCATTGTTAGAAGAAAGATATAAACGGAACGAATATTGGTCCAACAATTGCTCACTATCCCGGTCATTAAAAATAAATGACCTAACTCACCAATATGAGCCCATGACGCGTTGA 3552 0.3894 MAATIIGSAFLSATVQNLVEKLASKEFLDYFKKTKFDDSLLEQLGQTLLTIQPVLDAAEEKQINTPSVKQWLDGLKDALYDAEDLLNQISYDSLQCQMENTQAASKTKQVWNFFFSPSTNNYEEINSQMKKMCLNLKHFAENKDIISLQTKSVGVSRRTPSTPMFNESVMVGRKDDKDKVMNMLLSQSNTSQNNMGVVAIVGMGGVGKTTLAQLAYNDEKVEHHFDLKAWACVSEDFDVFRVTKALLESVTSKTWNDSNLDILRVELKKNLRDKRFFIVLDDLWNDSYSDWDELASPKQLVLLWMAEGFLDHSQDRKTMEEVGDEFFAELLSRSLIQQLHDNYGKQIFVMHDLVNDLATAVSGRSCYRHEFGAKSYENVRHLSYNQETYDVFKKFKTFDKFKRLRSFLAIGLGWAEYNLSRNVVNYLLPTFGRLRVLSLSKYRNITTLPVTVGNLVQLRYLDLSRTNIASLPDTICNLYYLQTLILSECSKLTELPEHVGKLINLRHLYIDRTSIIEMPKQIAELENLQTLNFFVVGKKNIGSTVRELGKFPKLRGKLFIKNLQNVIDVMEASDTNLKSKEHIEELKLQWGKETDDTLNERNVLDMLQPSANLKILNIGLYGGTHFPSWLGDPSFFNMVSLCIDECVNCTTLPPLGQLPSLKDLQIGSMTILETIGPQFYGMAAGGSNSSFQPFQSLENLFFLLMENWKEWHPFPDNMSPFPRLKTLRLLSCPKLKGHLPTHLPSIEEIDIDGCDHLLATPPTQHWLSSIKNIRIREHSNSESNTERTQYSLLESDSPCLLQTIDISNCHMLKSVPKMIINSTCLLCLDLYGISSLNAFPTNGLPTSLQSLCISKCENLTFLPPETWSNYTSLVTLKLKNSCSALTSFPLNCFPVLQDLSIRKCRSLESIFISETSSCSSSTLRSFVVNDCEALRSLPQRMDTLTALESITLCILPNLNLSLCEGAFLPPNLQIIIVYSVRITKPVTEWGLRGLTRVRSMDIRGDDIVKMLLKEPLLPISLVSLKFKSLFEMKSLEANGLRHLSSLDRIYFINCTELVSLSEKAFPSSLKTLYFWNCPRLNSLPEKAFPSSLKTLHFWNCPELNSLSEKVFPSSLKTLIFCECPRLESLPEDSLPTFLEELTIISCPLLEERYKRNEYWSNNCSLSRSLKINDLTHQYEPMTR* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4641 1183 PRINTS Disease resistance protein signature 197 212 - -
Psa5g4641 1183 PRINTS Disease resistance protein signature 270 284 - -
Psa5g4641 1183 PRINTS Disease resistance protein signature 476 492 - -
Psa5g4641 1183 SUPERFAMILY L domain-like 349 781 - -
Psa5g4641 1183 Gene3D - 14 131 - -
Psa5g4641 1183 PANTHER OS05G0414200 PROTEIN 22 291 - -
Psa5g4641 1183 PANTHER OS05G0414200 PROTEIN 299 821 - -
Psa5g4641 1183 SUPERFAMILY L domain-like 798 1159 - -
Psa5g4641 1183 Gene3D Ribonuclease Inhibitor 800 964 IPR032675 -
Psa5g4641 1183 PANTHER DISEASE RESISTANCE PROTEIN RP 22 291 IPR044974 GO:0006952
Psa5g4641 1183 PANTHER DISEASE RESISTANCE PROTEIN RP 299 821 IPR044974 GO:0006952
Psa5g4641 1183 Pfam Rx N-terminal domain 10 105 IPR041118 -
Psa5g4641 1183 Gene3D Ribonuclease Inhibitor 396 795 IPR032675 -
Psa5g4641 1183 Gene3D Ribonuclease Inhibitor 989 1178 IPR032675 -
Psa5g4641 1183 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 304 IPR027417 -
Psa5g4641 1183 Pfam NB-ARC domain 174 296 IPR002182 GO:0043531
Psa5g4641 1183 Gene3D - 154 302 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4641 Psa-Chr5 411832488 411837338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4641 445 540 WRKY Transcription Factor Family AT4G12020 37.113 2.29e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4641 - - mtr:MTR_3g032370 882.478