Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4640 ATGGGCACCAATCTTCCAGCCGATATTTTAGAGCAAAATCTCGGAGACAAAGAGATAAGTGCTCTTTGCTGGCCATCTTCTGATGGCTCCATTCTCGCTGTTGGATACTTAGACGGAGATATCCTGTTCTGGAACTTGTCATCTGCAGCACCTTCAAAAGGTCAACAAACCACTTCCTCTAAAAACGTTGTTTGGCTACAACTTTTAAACGCAGAAAGAAGAATCCCGGTCATTGTCTTACAATGGTCCAATAATCACAAATCTCACAACGATTGTACTGGTCAGTTGTTTGTCTATAGCGGTGACGAAATTGGTTCGGAAGAAGTTTTGACTGTTTTAACTCTCGAATGGTCATCTGGGATAGAGTCATTAAGATGCATCGGTCGTGCAGACCTTACACTTAACGGCACTTTCGCAGACTTGATTTTACTGCCAAGTCTAGGAGAAAGGGATTTGAATAGCAAAGACGATCATTTTGTGCTAACAAACCCTGGACAGATACACTATTACGATAATGATAGCTTGTCTGCATTATTGTCTCAGCAGAGTAGGACATCATCTGTATCTGCACAGGAGTTTCCGGTGCTAATACCTATGGCCGATCCATCTTTGACCGTTGCAAAACTCATCAAGTTGCCGAGTCAGTTAAACTCATCAAAAACTCTAGCTGAGGTAGCCTCAATTCTGAAAACTAGCACAAAACCTGGCTTAGCTAGCTTTGCAAATTGGCCCTTAACCGGGGTGTTCCTAGCCACTTGTCCACTGTTAAAGACTGAACATAGAATTGGAACACAACACGCCTGGCTTGTGGTGCTGATACTGCACAGGAACAACATAACAGGTTGCATGCAAAATCAATACGGCGGCAGAAATTTTCATGTTCATTCCTGCTCTAAAGTGGTTAAGATTAGACGAGAGTGTACAACAGTTTGCAGTCATTCGAGAATGGAATCGGAATTGGTGCAAGTCGCAGCAGAGTTAACAAAAGTGGTTCAGTCTCTTCCTTCCGACGCTGTTAACCACCTATTCTCCCTCGGGTTATGTGTGCACTGCATATTCCGTGTATTCGGTGTTCAAGCCAACACCATCTATGCTTCTCCATCTCTATCACCCACCATATTCGCTTTTCAACCACCAACAGATAAACTCTGCACCCTCTGCTTAGGTATCCTTCAGTTTAGATTTTGCAATGACGAACAACGTGTTAAGTCAACATTGAAATCGCAGCCACCACCGTTAACCGGAGAAGCGAACATGGTAGGTTTCAACTCTCAGTCGTCCTACGGTATGCAATCCATGCTCAAAGAAGGTCACAAGCATCTCTCCGGTCTCGACAAAGCCGTTCTCAAAAACACCGATGCCTGTAACCAACTCTCCACCATCACTCGCACTTCCCTCGGCCCCAACGGGATGAATGAGATGATTTTGGTGTTGGCTAGTAAGGCTCAGCAAGAGGAAATCGGTGATGGTGTTAATTTGACTATTTCTTTTGCCGGCGAGTTTCTTCATGGTGCCGAGGAGCTTATTAGGATGGGTTTGCATCCTAGTGAGATTATTAGTGGATATACTAAAGCTATTAAATTTTCAACTGAACAACTCTTCTCCTTGTCGGAAACAGGAAGACCTCAGGGAGATTCTTTTGAACCATTGACTGTCAAGCAGAGGAAGAAGCACATTAGCACACCCGTTCCTCATGATTCATACTCGGTTCTTCCTGTAAGCAGTTCAGGAAGGTATTTAGCAATCGTATGGCCAGATATTCCTTATTTCTTTATCTACAAGGTCAACGATTGGTCAATTGTTGACTCTGGAAGTGCAAGGCTTCTCGCTTGGGGTGCTTGTTGTGACAGATTTGCTATATTGGAATCATCATTACCTCCCGAGCTAGGCAATATGTCTAAACTGAGCTACCTGCAATTGAATGATAATCAACTGTTGTTGAAAGCACCTAGCATGTCCGACCTAGTGCCTCCGAAGCTTGTGGTTCTTCATATAGATTTGGCAATACACACTTTGGATGATATAATGAGAAGCACTGAAAATCTCAGTGAGAAATTTATCATAGGTTATGGTGCCTCTAGTACTGTATACAAGTGTGTCTTGAAAAATTCCCGACCGATTGCAGTCAAGCGGTTGTACAATCAGCATCCACACAATTTAAGGGAATTCGAAACAGAACTTGTAACGATAGGCAGCATTAGACATAGAAACCTTGTCGTAAAACTTGATTGGGAAACACGGATGAGGATTGTTGTTGGAGCTGCTGAAGGACTTGCTTATCTTCACCATGACTGCAACCCTCGAATTGTTCACAGGGACATTAATTCTTCAAATATTTTGCTGGATGAAAGCTGTGAAGCTCATCCTTCTGATTTTGGCACTGCAAAATGCATCCCAGCCACAAGAACTCATGCCTCAACCTATGTCCTTGGAACTATAGGCTATATTGATCCTGGATATGCACGAACTTCTTGGCTGAATGAGAAATCAGATGTATATAGCTTTGGCATCGTTCTGCTAGAGCTACTCACTGGGAAGAAGGCAGTAGATGATGATAGCCAAATGTCTAGCAAATCAACACCATTTCATCAGATCGAGGGTCTTGGGCTTATGCATTCTATGATATTATTGATGGTCGGGAGCTCGTGA 2649 0.4326 MGTNLPADILEQNLGDKEISALCWPSSDGSILAVGYLDGDILFWNLSSAAPSKGQQTTSSKNVVWLQLLNAERRIPVIVLQWSNNHKSHNDCTGQLFVYSGDEIGSEEVLTVLTLEWSSGIESLRCIGRADLTLNGTFADLILLPSLGERDLNSKDDHFVLTNPGQIHYYDNDSLSALLSQQSRTSSVSAQEFPVLIPMADPSLTVAKLIKLPSQLNSSKTLAEVASILKTSTKPGLASFANWPLTGVFLATCPLLKTEHRIGTQHAWLVVLILHRNNITGCMQNQYGGRNFHVHSCSKVVKIRRECTTVCSHSRMESELVQVAAELTKVVQSLPSDAVNHLFSLGLCVHCIFRVFGVQANTIYASPSLSPTIFAFQPPTDKLCTLCLGILQFRFCNDEQRVKSTLKSQPPPLTGEANMVGFNSQSSYGMQSMLKEGHKHLSGLDKAVLKNTDACNQLSTITRTSLGPNGMNEMILVLASKAQQEEIGDGVNLTISFAGEFLHGAEELIRMGLHPSEIISGYTKAIKFSTEQLFSLSETGRPQGDSFEPLTVKQRKKHISTPVPHDSYSVLPVSSSGRYLAIVWPDIPYFFIYKVNDWSIVDSGSARLLAWGACCDRFAILESSLPPELGNMSKLSYLQLNDNQLLLKAPSMSDLVPPKLVVLHIDLAIHTLDDIMRSTENLSEKFIIGYGASSTVYKCVLKNSRPIAVKRLYNQHPHNLREFETELVTIGSIRHRNLVVKLDWETRMRIVVGAAEGLAYLHHDCNPRIVHRDINSSNILLDESCEAHPSDFGTAKCIPATRTHASTYVLGTIGYIDPGYARTSWLNEKSDVYSFGIVLLELLTGKKAVDDDSQMSSKSTPFHQIEGLGLMHSMILLMVGSS* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4640 882 Gene3D Phosphorylase Kinase; domain 1 656 742 - -
Psa5g4640 882 Gene3D - 424 566 IPR027413 -
Psa5g4640 882 SUPERFAMILY GroEL equatorial domain-like 440 703 IPR027413 -
Psa5g4640 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 740 856 - -
Psa5g4640 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 648 739 - -
Psa5g4640 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 622 650 - -
Psa5g4640 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 622 650 - -
Psa5g4640 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 648 739 - -
Psa5g4640 882 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 740 856 - -
Psa5g4640 882 Gene3D Transferase(Phosphotransferase) domain 1 743 873 - -
Psa5g4640 882 Pfam Protein kinase domain 749 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4640 882 Gene3D - 4 131 IPR015943 GO:0005515
Psa5g4640 882 SUPERFAMILY WD40 repeat-like 18 85 IPR036322 GO:0005515
Psa5g4640 882 ProSitePatterns Protein kinases ATP-binding region signature. 688 710 IPR017441 GO:0005524
Psa5g4640 882 Pfam TCP-1/cpn60 chaperonin family 474 536 IPR002423 GO:0005524
Psa5g4640 882 ProSiteProfiles Protein kinase domain profile. 618 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4640 882 SUPERFAMILY Protein kinase-like (PK-like) 665 856 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4640 Psa-Chr5 411669461 411674067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4640 659 855 Receptor kinase-like Gene Family AT5G62230 70.130 2.95e-101 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Psa5g4640 Pkinase 4e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4640 K20718 K08518 gmx:100776508 360.918