Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4630 ATGTCTCTATGGCTTATTGCATTCTCCACTCTCATATTATCTATCTTTATATACCGTTTTCTAAAATTTGCTACAAAATCTTCTTCTTCTTCTTCATCACTCCCACTTCCACCAGGACCAAAACCATGGCCTATAATAGGTAACATTCCACACTTGGGCTCTTCCCCACACCAATCTCTTGCAGCCTTGGCTGAAACCTATGGCCCGTTGATGCACCTCAAATTAGGGTTTGTCGATGTTATCGTCGCGGCTTCCGCTACCGTGGCCGAACAATTCTTAAAGGTTCATGATGCGAACTTTAGTAGCCGGCCACCGAATGCCGCAGCTAAAAATATGGTTTATAACTATCAAGATCTTGTGTTTGCTCCTTATGGCCCAAGGTGGAGACTGCTCCGCAAAATTTCTTCCGTTCATCTCTTTTCCAACAAAGTTATGGCTGAATTCCAACATTTACGTGAGGAAGAGGCAGCAAGATTGACAAGCAATTTAGCAAGTAACTATTCAGATACAAAAGCTGTCCAATTGGGACAAGTGTTGAATGTATGTACAACCAATGCACTTGCTAGGGTTATGATAGGAAGAAGAGTATTCAATGATGAGAGTGGTGGTAATGATCCTAAAGCTGATGAGTTCAAGAATATGATTCTTGAAATGATGGTGTTAGCTGGAGTTTTCAACATTAGTGACTTCATTCCTTCATTGGAATGGTTAGATCTTCAAGGAGTTCAAGCTAAAATGAAAAAGTTGCACAAAAAGTTTGATGCATTTTTAACCAATATTATTGAAGAACATGATAATTCCAATTCTAAGAGTGAGAAACATAAAGATTTGTTGACTACTTTGTTGGCACTTAGAGATGAAGGAGATGATGATGGAAATAAACTCACTAATATTGAGATCAAAGCACTCCTTTTGAACATGTTTGCAGCTGGGACAGACACATCATCAAGCACCACAGAATGGGCTATTGCTGAGTTAATAAAAAATCCAAAAATCCTAGCCCAAGTCCAACAAGAATTGGACAATGTTGTAGGACGAGACAGAAATGTGAAAGAAGATGACATACCTAATTTGCCCTACCTACAAGCAGTCATAAAAGAAACATTTCGTTTGCATCCATCAACACCTCTTTCACTTCCAAGAATTGCTTCCGAAAGTTGTGAGATATTTGGGTACCATATTCCAAAGGGTGCAACTATATTGGTTGATGTATGGGCCATAGCTCGTGACCCAAAACAATGGGCAGACCCCTTAGTGTTCAAGCCTGAAAGATTCTTACCAGGTGGTGACAAGTATGATGTTGATATTAAGGGAAATGATTTTGAAGTTATACCTTTTGGTGCTGGACGGAGAATTTGTGTTGGGATGAGTCTTGGACTTCGTATGGTTCAACTTTTAACTGCTACGTTAGCCCATTCGTTTAATTGGGAACTTGAGAGTGGGCTTAAAGCTGAAAAGATGAACATGGATGAAGCTTTTGGACTTACTCTTCAACGAGCCGTGCCATTATCTGTGTATCCTAAACCTAGGCTCTCTCCTAATGTGTATTAA 1551 0.3978 MSLWLIAFSTLILSIFIYRFLKFATKSSSSSSSLPLPPGPKPWPIIGNIPHLGSSPHQSLAALAETYGPLMHLKLGFVDVIVAASATVAEQFLKVHDANFSSRPPNAAAKNMVYNYQDLVFAPYGPRWRLLRKISSVHLFSNKVMAEFQHLREEEAARLTSNLASNYSDTKAVQLGQVLNVCTTNALARVMIGRRVFNDESGGNDPKADEFKNMILEMMVLAGVFNISDFIPSLEWLDLQGVQAKMKKLHKKFDAFLTNIIEEHDNSNSKSEKHKDLLTTLLALRDEGDDDGNKLTNIEIKALLLNMFAAGTDTSSSTTEWAIAELIKNPKILAQVQQELDNVVGRDRNVKEDDIPNLPYLQAVIKETFRLHPSTPLSLPRIASESCEIFGYHIPKGATILVDVWAIARDPKQWADPLVFKPERFLPGGDKYDVDIKGNDFEVIPFGAGRRICVGMSLGLRMVQLLTATLAHSFNWELESGLKAEKMNMDEAFGLTLQRAVPLSVYPKPRLSPNVY* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4630 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Psa5g4630 516 Gene3D Cytochrome P450 22 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 Pfam Cytochrome P450 37 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PANTHER FLAVONOID 3'-MONOOXYGENASE 4 509 - -
Psa5g4630 516 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g4630 516 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 509 - -
Psa5g4630 516 SUPERFAMILY Cytochrome P450 37 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4630 Psa-Chr5 409690473 409694619 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4630 8 516 Cytochrome P450 AT5G07990 64.902 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4630 K05280 - gmx:547475 797.349