Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4593 ATGGCCACCGTTACTACACAAGCTTCCGCCGCGATTTTTGGGCCATGTGGTTTGAAATCAAGGTTTCTTGGTGGTTCTTCCGGGAAGTTGAACAGAGGAGTGGCTTTTAGGCCTGTTGGATGTTCACCTTCTGCTTCTTTTAAAGTTGAAGCTAAGAAAGGAGAGTGGTTGCCAGGTTTGGCCTCCCCAGGTTACCTAACTGGCAGTCTTCCCGGAGACAACGGATTTGATCCATTGGGACTTGCGGAGGATCCAGAGAATTTGAGGTGGTTTGTTCAAGCCGAGCTAGTGAACGGGCGATGGGCAATGTTGGGTGTTGCAGGGATGTTACTCCCTGAGGTATTCACAAGCATTGGAATCATCAATGTTCCGAAATGGTATGACGCAGGGAAAGAAGAATACTTTGCTTCATCTTCAACACTCTTCGTGATCGAGTTCATTTTGTTCCATTATGTCGAGATTAGAAGATGGCAAGACATTAAAAACCCTGGCAGTGTTAACCAAGATCCTATCTTTAAGCAATACAGCTTGCCCGCAGGCGAGGTTGGTTACCCTGGCGGGATCTTTAATCCTTTGAACTTCGCACCAACTTTGGAGGCTAAAGAGAAGGAAATTGCAAATGGGAGATTGGCAATGTTGGCATTCTTGGGATTTATAATTCAGCACAATGTGACAGGAAAAGGACCATTTGATAACTTGTTGCAGCACATTTCTGATCCATGGCACAACACCATTGTTCAAACACTGGGTGGAAACTAG 759 0.4572 MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4593 252 Pfam Chlorophyll A-B binding protein 63 222 IPR022796 -
Psa5g4593 252 Gene3D Chlorophyll a/b binding protein domain 63 242 - -
Psa5g4593 252 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 252 - -
Psa5g4593 252 SUPERFAMILY Chlorophyll a-b binding protein 52 249 - -
Psa5g4593 252 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 252 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4593 Psa-Chr5 406510883 406513624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4593 38 245 Chloroplast and Mitochondria Gene Families AT3G61470 52.995 1.65e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4593 K08910 - rcu:8263414 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4593 5 406510883 406513624 Psa5g4593 5 406510883 406513624 ECH