Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4589 ATGATGTGTGGATCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAATCCATCACCGGACATCACTTATTGGAGCGAGATGGCATGACTGAATTTGTCATGGCACTGTCAAATCCTTTGAAAGGTGAGCGTAAAGCAGGCACCGTTGGCAAACCATTACTTGGTATGCATGTCAAGATTCTTGCAGATGAGGAGCATGAGAGTGAGGAATCGGGGATTGGCGAGCTTTGCGTTAAAAGCCCTTCATTGTTTACAGAATATTATAATCTTCCTGAGGATGACCCAAGGAATCCAGCTGTTATTGCTGATAATGTTGGTGATATTGCTGGTATGGGATCCAATCTATTTGGTGCTTATGTGGATCTCCTTGCTTGCTTGCTAACCACCTTATTTGCAACTGACTTTTTTGAGATCAAACTTGTAAAGGAATTTGAGCCAGCATTGAAAAATAGCATTGTCGTTTCAACAGTACTGATGACTGGTAGAATTGCAATTGTTAATTGGCTTATCATTGGATTTGTCACTGAATACTATACCGGCGATGCATACAGCCCTATGCAAGATGTTGCTGATTCTTGCAGGACTGTTTTGATGCCATGTATGGTGTTGCTGTTTGCTACACTTGGAATGTTAAATACTATAGCAATCGGAGTAGCCATCGATGCATACGGTCCAATCAGTGACAATGCCGGAGTTGTTGCCGAGATGGCTGGAATGAGTCACAAAATTCATGAGAGAACCGATGCTCTTGATGCTGCAGGAAACACAACTGCTGCCATTGGAAAGGGGTTTGCTATTGGTTATGCCGCCCTTGTGTCTTTGGCTCTTTTTGGTGCCTTTGTGAGCCATGCTGGTATTACAACAGTTGATGTCCTGACTCCCAAGGTTTTCATTGGTCTGATTGTGGGTGCCATGCTCTCTTACTGGTTTTCTGACCTGACCATGAAGAGTGTTGGAAGCGCAGCATTGAAGATGGTTGAGAAAGTTTGCAGGCAATTCAACACGATTCCCGGATTGATGGAGGGAACTGCGAAACCTGACTATGCCACATGTGCTACAATCACCACCTCAGATCCAAGTCATGGCTCTTGTCTATATCTTGGAAGTTTTGGCAACAAAAATAGCACCTTTGGCAACTTCACAGCACCATTAATGAATTCAAATTCCGATTCTTCAGCCTACAACATCCACAGCCGCAAATTGAGAATTAAAAGCCTTCTAATGGTGACAGGATTTCTAATACTGGGAGTGGTTTTGCTGTATTCGGTAGGGAATGAGTATACAACATTTGTTGGAGGAGGAGGTGTCTTTAATTCTTCTCAGAATGCTGCTGATGAGTATGACTTTGGAGACTTCGTCTTTCCTGACAGTGCTGTTTCGAGCTTTGGAAAAGCTCCGAACATTCCTGATATCGTAGAGAGTAGCCGCTACGTTACCTCTTCACCCGCGATCAGAGTTCGTTACCATAGCAAGTAA 1479 0.4375 MMCGSSALPQPVMQEWESITGHHLLERDGMTEFVMALSNPLKGERKAGTVGKPLLGMHVKILADEEHESEESGIGELCVKSPSLFTEYYNLPEDDPRNPAVIADNVGDIAGMGSNLFGAYVDLLACLLTTLFATDFFEIKLVKEFEPALKNSIVVSTVLMTGRIAIVNWLIIGFVTEYYTGDAYSPMQDVADSCRTVLMPCMVLLFATLGMLNTIAIGVAIDAYGPISDNAGVVAEMAGMSHKIHERTDALDAAGNTTAAIGKGFAIGYAALVSLALFGAFVSHAGITTVDVLTPKVFIGLIVGAMLSYWFSDLTMKSVGSAALKMVEKVCRQFNTIPGLMEGTAKPDYATCATITTSDPSHGSCLYLGSFGNKNSTFGNFTAPLMNSNSDSSAYNIHSRKLRIKSLLMVTGFLILGVVLLYSVGNEYTTFVGGGGVFNSSQNAADEYDFGDFVFPDSAVSSFGKAPNIPDIVESSRYVTSSPAIRVRYHSK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4589 492 Pfam Inorganic H+ pyrophosphatase 206 359 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4589 492 Pfam Inorganic H+ pyrophosphatase 90 125 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4589 492 Pfam AMP-binding enzyme 1 93 IPR000873 -
Psa5g4589 492 SUPERFAMILY Acetyl-CoA synthetase-like 1 93 - -
Psa5g4589 492 Gene3D - 1 117 IPR042099 -
Psa5g4589 492 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 206 358 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4589 492 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 90 121 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4589 492 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 170 197 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4589 492 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 121 171 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4589 492 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 206 358 - -
Psa5g4589 492 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 90 121 - -
Psa5g4589 492 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 170 197 - -
Psa5g4589 492 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 121 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4589 Psa-Chr5 405669232 405671120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4589 90 351 Primary Pumps ATPases AT1G15690 59.178 3.50e-127 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4589 K23025 - csin:114295637 374.4