Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4576 ATGTCTAAGGCCCCACCACCCACACCCCCATCTCCACCATTCTTTGGAGCTGCACCATCTTCACTTCTTCCTAGATCAAGTGGAGCACCTTCACCACCTCCACCACCACCTCCTTTGTCCAAGGCTCCACCATTCTATGGAGCTCCACCCCCACCCCCACCCCCACCATTCTATGGAGCTCCACCACCGCCACCATCACCTCTTTTTTCATCAAGTGGAGCACCTCCACCACATCTCCTTTCGATGTCTAAGGCCCCACCACCCCCACCGCCAGCCCCGCACCCACCATCCTATGGAGCTCCACCCCCACCCCCACCATTCTATAGAGCTCCACCACCGCCACCATCACCTCTTTTTTCATCAAGTGGAGCACCTCCACCACTATCTCCTTCATTGTCTAAGGCCCCACCACCCCCACCTCCACCATCCTATGGTACTCCAACCCCACCCCAACCTCCACCATATCTTCCTACATTAAGTGGAATACCTCCAACACCACCGACTCCTGCAATGTCTAAGGCCCCACCATCCCCACTTCCACCACTAAATGGAGCTCCACCACCACCACTAGCACCATATCTTCCTGCATCTAGTGGAGCACCTCAACCACCACCACCTCTACCTCCTTCAATGTCTAAGACCCCACCACCACCACCTCCACCATTCTATAGGGCACCACCACCACCACCACCATATCTTCCTGCATCTAGTGGAGCACCACCACCACCACCACCACCACCATATCTTCCTGCATCTAGTGGAGCACCATCACCACCACCACCGCCTTATCTTCCTGCATCTAGTTGGATCACCACCACCACCCCACCGCCGCCTTATCTTCCCGGCATCTATGGAGCACCACCACCGCCTCCCCCATTTTATGGAGCAAAGCACCACCACCCCAGCCTCCACCATTTCTATGGAGCTCCACCACCGCCACCACCTCCAATGCATGCACACAAGCACCTCCTCCTCCGCCACTCGGGTGGTCGAGGCCCACCTCCTCCTCCACCTCCAGGTGGTCGAGGCCCTGCTCCACCACCGCCTCCTGGAGCTCATGCACCTGGTGCTCCCGCACCTCCTAGGCCACCCGGTGGTGCACCCCCACCACCTGGTGCTGATCCAAGAGGTAGAGGTCGCGGACTTGCACGTCCTACTGGTGCAGCAGCACCTCGACGATCCTCATTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAGAGACATGGAGAAACTCAAATTGGGCAAGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTGTAAATGTTCCAAAACCTGCTGCTTCTGGTGGTAAATCTGGAGGGCTGGGCAAATCTGCAGGATCCAAACCTGAGAAAATCACCTTGGTTGATTTAAGGAGAGCCTATAATACAGAAATTATGCTTACAAAGGTTAAGATGCCGCTTCCTGATATGATGGCTGCAGTACTGGCTTTGGATGACTCAGTATTAGATGTTGATCAGGTGGAAAATCTTATTAAATTTTGTCCTACCAAAGAGGAAATGGATCTTTTGAAGGCATATACTGGCAACACGGAGAATTTGGGAAAGTGCGAACAGTTCTTTATGGAGCTGATGAAAGTGCCACGAGTTGAGGCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGTGTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGAAGAGGTCCGAAATTCAGTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATGCATTGAATCAAGGGACAGCAAGAGGAGCTGCCGTTGGATTTAAGTTAGACAGCCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAGCAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTTCACTCCTTGATTTTCATATTGACCTAGTTAGCGTAGATACTGCCTCTAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCTTCTGAAAGTGATGGCCCAGTATCTGAAGTTTTCCGTAAGACATTGAAAGGTTTCGTTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGACGCACTTGCACAGTATTTCAATGAGGATCCTGCCCGTTGTCCTTTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATAAGGATGTTTCTCAAAGCACATGATGAGAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATAGAGAAGAAAGCTAAGAAGGAGGCTGAAATGGAAAAGGGTAAAGGCAGTGGTTTGACAAGGAAGAGCAAAAAAGTTAAAGAAGAAGAAAGCTGA 2448 0.4882 MSKAPPPTPPSPPFFGAAPSSLLPRSSGAPSPPPPPPPLSKAPPFYGAPPPPPPPPFYGAPPPPPSPLFSSSGAPPPHLLSMSKAPPPPPPAPHPPSYGAPPPPPPFYRAPPPPPSPLFSSSGAPPPLSPSLSKAPPPPPPPSYGTPTPPQPPPYLPTLSGIPPTPPTPAMSKAPPSPLPPLNGAPPPPLAPYLPASSGAPQPPPPLPPSMSKTPPPPPPPFYRAPPPPPPYLPASSGAPPPPPPPPYLPASSGAPSPPPPPYLPASSWITTTTPPPPYLPGIYGAPPPPPPFYGAKHHHPSLHHFYGAPPPPPPPMHAHKHLLLRHSGGRGPPPPPPPGGRGPAPPPPPGAHAPGAPAPPRPPGGAPPPPGADPRGRGRGLARPTGAAAPRRSSLKPLHWSKVTRALQGSLWEELQRHGETQIGQEFDVSELEKLFAVNVPKPAASGGKSGGLGKSAGSKPEKITLVDLRRAYNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLIKFCPTKEEMDLLKAYTGNTENLGKCEQFFMELMKVPRVEAKLRVFCFKIQFQCQITEFNKSLNLVNSACEEVRNSVKLKEIMKKILYLGNALNQGTARGAAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPSLLDFHIDLVSVDTASKIQLKSLAEEMQAITKGLEKVNQELAASESDGPVSEVFRKTLKGFVNEAKSQVDSVTRLYSDVGRNADALAQYFNEDPARCPFEQVTATLLNFIRMFLKAHDENIKQAELEKKKAEKEAEIEKKAKKEAEMEKGKGSGLTRKSKKVKEEES* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4576 815 MobiDBLite consensus disorder prediction 304 398 - -
Psa5g4576 815 ProSiteProfiles Formin homology-2 (FH2) domain profile. 386 787 IPR015425 -
Psa5g4576 815 PANTHER FORMIN-LIKE PROTEIN 12 271 761 - -
Psa5g4576 815 PANTHER FORMIN-J 271 761 - -
Psa5g4576 815 Pfam Formin Homology 2 Domain 392 761 IPR015425 -
Psa5g4576 815 MobiDBLite consensus disorder prediction 773 815 - -
Psa5g4576 815 MobiDBLite consensus disorder prediction 80 269 - -
Psa5g4576 815 Gene3D Formin, FH2 domain 405 800 IPR042201 -
Psa5g4576 815 SMART it6_source 1 815 IPR015425 -
Psa5g4576 815 Coils Coil 762 796 - -
Psa5g4576 815 Coils Coil 668 688 - -
Psa5g4576 815 MobiDBLite consensus disorder prediction 1 269 - -
Psa5g4576 815 SUPERFAMILY Formin homology 2 domain (FH2 domain) 334 781 - -
Psa5g4576 815 MobiDBLite consensus disorder prediction 330 375 - -
Psa5g4576 815 MobiDBLite consensus disorder prediction 1 17 - -
Psa5g4576 815 MobiDBLite consensus disorder prediction 26 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4576 Psa-Chr5 404798675 404809498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4576 378 790 FH2 protein (formin) Gene Family AT2G25050 60.455 4.59e-176 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4576 - - cam:101505448 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4576 5 404798675 404809498 Psa5g4576 5 404798675 404809498 ECH