Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4569 ATGGCTGGTATGGATGTACTTTGCAGTGACAATACTGGTACACTTACACTTAACAAGCTGAGTGTTGACAAGAACTTGATTGAGGTCTCTGAAAAGGGTGTGGACAAGGAACATGTTATGCTTCTTGCTGCAAGGGCTTCCAGGATTGAAAACCAGGATACCATAGATGCCGCCATTGTTGGAACTCTAGCTGATCCAAAAGAGGCAAGGGCTGGAGTAAGAGAGATTCATTTCTTACCATTCAATCCCGTGGATAAGAGAACAACCTTGACTTACATTGATAGCAATGGAAATTGGCACCGTGCAAGCAAAGGTGCTCCAGAGCAGATCATGAACCTGTGTAACCTTAGGGAAGATGCAAAGCGGAACATCCATGCTATTATTGACAAGTTTGCAGAGAGAGGTCTTCGTTCTCTTGCTGTTTCTAGACAGGAGGTTCCTGAGAAAACTAAAGAAAGCGCTGGTGGTCCTTGGCAGTTTGTTAGTTTGTTGTCACTGTTTGACCCACCTAGGCATGACAGTGCTGAAACTATTCGGAGAGCTCTTCATCTTGGTGTCAATGTTAAGATGATTACTGGTGATCAACTTGCCATAACAAAGGAAACTGGGAAAAGCACAAGCATTTCATTGCTACATAATCACTTGGAAGTTTTTGTGTTAACAACCATTCTCGAGTTGACTGGAGAGATGCAAAGTGATCTTATTCAATCACAATCCATTACTTTCCTTGAGATATTATTCAGATCTGCTCTTCTCTATAGTGAGAGATGCAAAGTGATCTTATTCAATCACAATCCATTACTTTCCTTGAGATATTATTCAGATCTGCTCTTCTCTATAGGTTCAGTGATCCTATGA 858 0.4149 MAGMDVLCSDNTGTLTLNKLSVDKNLIEVSEKGVDKEHVMLLAARASRIENQDTIDAAIVGTLADPKEARAGVREIHFLPFNPVDKRTTLTYIDSNGNWHRASKGAPEQIMNLCNLREDAKRNIHAIIDKFAERGLRSLAVSRQEVPEKTKESAGGPWQFVSLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAITKETGKSTSISLLHNHLEVFVLTTILELTGEMQSDLIQSQSITFLEILFRSALLYSERCKVILFNHNPLLSLRYYSDLLFSIGSVIL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4569 285 PANTHER CALCIUM-TRANSPORTING ATPASE 1 206 - -
Psa5g4569 285 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 14 173 IPR023299 GO:0000166
Psa5g4569 285 PRINTS P-type cation-transporting ATPase superfamily signature 8 22 - -
Psa5g4569 285 PRINTS P-type cation-transporting ATPase superfamily signature 162 173 - -
Psa5g4569 285 PRINTS P-type cation-transporting ATPase superfamily signature 184 194 - -
Psa5g4569 285 Gene3D - 20 167 IPR023299 GO:0000166
Psa5g4569 285 SUPERFAMILY HAD-like 4 210 IPR036412 -
Psa5g4569 285 PANTHER PLASMA MEMBRANE ATPASE 1 206 - -
Psa5g4569 285 Gene3D - 5 208 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4569 Psa-Chr5 403312382 403313239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4569 1 204 Primary Pumps ATPases AT2G24520 82.353 3.67e-123 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4569 K01535 - gmx:100816905 367.851