Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4525 ATGGTTTCTCCCCCCAACACAAACACCACAAACCACTACGGAAAATTTCTGATACCATCACCACTACCACAATCACCATCCTTTGAAAAATATATTCATCTCCCTAGGGAACCAAGGGAGAATCATACCACACATCCATCTAAGAGATTTAGGGGAAGAACGCAGGGCTCTAATAACAAGTGCAAATCTCCTATTAAGATTGATGAAGACCCTGGTAACATTATGAAATTGATTTTTATCAAAATCCCTGTTGGACACGATGTTGTGGATTCTCTCATCAATGTTGCTTTGCATCATCAAGCTAACATTACAGTCCTAGGAGGTTCTGGTCTTGTCTCTGATGTTACTCTTCACAACTCAGTTTCCCAAGCCCCTGCATTCACAATTTATGGATCCTTTCAAATGATATCTATCACAGGGACTTATTTCATTTCCAATTATGGTAGTAATCCTTCTGAAGACATCATTGAACCTATTTATTCCTCTTTCTCTCTTTTTCTAACATGTGGATATGGGGAAGTGTTTGGTGGGATTATTGTTGGAAAGGTTAAAGCTGCAGATGATATTCTAATCACAGTTGCTCTTTCAAAGAAGCATGAGTTTTATAGGGTTCCCACCATCAATGGAAGTGTTCGAGAAGTTGAAGAAGATGATCTAAAAGGCCTTGATGGTGTCATTGTCAATGTTGACCACGTTGAAGCTGAACCCAAAAACACTCATATTATATCTAATTATGATGTTACTGGTGCAAGTTCCACTCATCTAAATCACCAATTCCTTGCTCTTCCTTCTAGCAATGATAATGTCATACAGTGGAACCATCACAGTCATACTAATAGTTACTAG 846 0.3853 MVSPPNTNTTNHYGKFLIPSPLPQSPSFEKYIHLPREPRENHTTHPSKRFRGRTQGSNNKCKSPIKIDEDPGNIMKLIFIKIPVGHDVVDSLINVALHHQANITVLGGSGLVSDVTLHNSVSQAPAFTIYGSFQMISITGTYFISNYGSNPSEDIIEPIYSSFSLFLTCGYGEVFGGIIVGKVKAADDILITVALSKKHEFYRVPTINGSVREVEEDDLKGLDGVIVNVDHVEAEPKNTHIISNYDVTGASSTHLNHQFLALPSSNDNVIQWNHHSHTNSY* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4525 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 30 274 IPR014476 GO:0003680
Psa5g4525 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 73 199 - -
Psa5g4525 281 MobiDBLite consensus disorder prediction 35 59 - -
Psa5g4525 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 78 194 IPR005175 -
Psa5g4525 281 Gene3D - 76 217 - -
Psa5g4525 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 30 274 - -
Psa5g4525 281 ProSiteProfiles PPC domain profile profile. 72 217 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4525 Psa-Chr5 398205901 398206746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4525 29 221 AT-hook Motif Nuclear Localized (AHL) Family AT1G14490 29.592 7.01e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4525 - - cam:101509190 197.208