Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4444 ATGCTATTGCACTCACCGGAAAATATTTATGGACTCCACTCTAATACTGATTTAGAGGGTTTTGCAAAAGAAATAATTAGACAGACATCTGGTTTCATGCCCAGGGATATTTGTGCTTTAATTGCAGATGTTGGTGCCAACTTATTTCCCAGCAGCAATGCCGAAGTAGACAAAGATGAACCCGAAGGTGCAGATAGTTCTCTTAGTTCAAAGGTGGCAGGGGACAACAACAAGTCAGAAGTTTCAGCTCGAAAACCTGGGAAAGAAGACTGGGTGAATGCTTTGGAACGATCAAAGAAAAGAAATGCGTCAACATTGGGCACTCCAAAGGTTCCAAACGTAAAATGGGACGATGTTGGTGGGATTGAAGATGCCCGATCAGCCCGTCCATGTGTCATCTTCTTTGATGAGCTGGACTCTCTTGCACCTGCTCGGGGAGCTTCCGGAGATTCTAGGGGTGTTATGGACAGAGTGGTTTCGCAGATGCTTGCAGAAATTGACGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGAGAATACTTGATAGACCCCGCACTTCTTCGCCCTGGTCGTTTTGATAAATTGCTATATGTTGGCGTCAACTCTGATGCATCTTACAGAGAGTGG 645 0.4419 MLLHSPENIYGLHSNTDLEGFAKEIIRQTSGFMPRDICALIADVGANLFPSSNAEVDKDEPEGADSSLSSKVAGDNNKSEVSARKPGKEDWVNALERSKKRNASTLGTPKVPNVKWDDVGGIEDARSARPCVIFFDELDSLAPARGASGDSRGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNREYLIDPALLRPGRFDKLLYVGVNSDASYREW 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4444 215 Pfam ATPase family associated with various cellular activities (AAA) 122 205 IPR003959 GO:0005524|GO:0016887
Psa5g4444 215 CDD AAA 122 205 - -
Psa5g4444 215 PANTHER PEROXISOME ASSEMBLY FACTOR 2 18 126 - -
Psa5g4444 215 PANTHER PEROXISOME ASSEMBLY FACTOR 2 123 214 - -
Psa5g4444 215 PANTHER AAA-FAMILY ATPASE 123 214 - -
Psa5g4444 215 PANTHER AAA-FAMILY ATPASE 18 126 - -
Psa5g4444 215 Gene3D - 123 206 IPR027417 -
Psa5g4444 215 ProSitePatterns AAA-protein family signature. 176 194 IPR003960 GO:0005524|GO:0016887
Psa5g4444 215 MobiDBLite consensus disorder prediction 53 91 - -
Psa5g4444 215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4444 Psa-Chr5 385767399 385768284 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4444 125 208 Calmodulin-binding Proteins AT3G56690 42.857 4.41e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4444 K13339 - gmx:100820183 169.859