Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4439 ATGACAAGTAATGAAAATGCACAGGATACAAAGCCAATAGTGTCAATGTTGCAGCCACGTCCTGTGAATCAAGCTCAAGCAAATGTGAACATTTTGAATAATCTCTCTCAACCACGGCAGGTAATGAACTCTGCTGCTTTAAGTGGCGGAACTTCTATGGGACTTCCATCAATGGGTCAAACTCTTGTTGCCATTCACATGTCAAACATGATATCCAATGGGATGACATCTTCTGGACCTGCAGACAAAACTCAGGTCCTGTTGATTGCTGCAGCTGATAGTTCAGAGGGTCTACCTTCAACCATCAGACGCTGCTTTAGCCATGAAACGAAAATGGGGCCTTTGATAGAAGAGCAAAGGGCTGAGATGCTATTTCACTCACCGGAAAATATTTATGGACTCCACTCTAATACTGATTTAGAGGGTTTTGCAAAAGAAATAATTGGACAGACATCTGGTTTCATGCCCAAGGATATGTGTGCTTTAATTACAGATGCTGGTGCCAACTTATTTCCCAGCAGCAATGCCGAAGTAGAGAAAGTTGAACCCGAAGGTGCAGATAGTTCTTTTAGTTCAAAGGTGGCAGGGGACAACAACGAGTCAGAAGTTTCAGCTCAAAAACCTGGGAAAGAAGACTTGGTGAATGCTTTGGAACGATCAAAGAAAAGAAATGTGTCAGCATTGGGCACTCCAAAGGCCCGATCAGCCCGTGCATGTGTCATCTTCTTTGATGAGCTGGACTCTCTTGCACCTGCTCGGGGAGCTTCCAGAGATTCTGGGGGTGTTATGGACATAGTGGTTTCGCAGATTCTTGCAGAAATTGACGGCTTAAGTGATTCAACACAGGATCTATTTATTATAGGTGCAAGTAATAGAGAAGACTTGATAGACCCCACACTTCTTCACCCTGGTCGTTTTGATAAATTTCTATATGTTGGCGTTAACTCTGATGCATCTTACAGAGAGCGGAATTGTGAAAGTTGTGCTCTGCGAGAGATTTCGAAAGCTGAATATAATCAAGGGGACTTGCTTGATGATTGTGAAACGGAAAACCCGCTTGCTATGGTATTGTTTCAAAAGCTTGACGATGATTCCGTGGAACTTGTTGCTGCAACTGTAAACTTCTCATCCAATAATTTGGTTGGAAAAGGTGGCAGTAGTGATGTTTACAGAGGGTGTCTTCCCGAAGGCAAGGAATTGGCTGTGAAAATTTTGAAACCGTCGGAGAATATGGTAAAAGAGTTCGCTCAAGAAGTTGAGATTGTTACAACTTTGCATCATAAGAACACAATATCTCTATCTGGTTTTTGTTTAGAGGGAAACCATTTATTACTGGTTTATGATTTTTTATCAAGAGGAAGCCTAGAAGAAAACCTTCACGGTAACAGAATTAACTATAATTCATTTGGCTGGCAAGAGAGGTACCGAGTGGTTGTGGGTGTAGCCGAGGCCTTGGATTATCTGCATAATGGCTGTGCCCGAGCTGTAATCCATAGGGATGTCAAATCTTCCAATATCCTTCTTTCAGATGATTTTGAGGCTCAGCTCTCAAATTTTGGACTGGCTAGTTGGGCTGCTACTCTTTGTATTAGACGAGTTCCTAGATTGCGACCTCAAATCCGAGTTATATTGAAACTTCTTCATGGTGATGAAGAAGTAACAAGATGGGAAGAACAAGAAGTTTGTGCATCAGAGATACATGATGGATTTGACGAGGAACCAGTTCGAACAAATATCCAGTCCCACCTTAACCTTACTTTGCTAGACTTGGAGGATGATGCAGTTTCTATCAGTAGCACTGAGCAGAGTGTCTCATTGGAGGATTATTTGCAAGGAAGGCATTTCTTTACAGTCATTTCATGGAGGGTCATATGA 1875 0.4224 MTSNENAQDTKPIVSMLQPRPVNQAQANVNILNNLSQPRQVMNSAALSGGTSMGLPSMGQTLVAIHMSNMISNGMTSSGPADKTQVLLIAAADSSEGLPSTIRRCFSHETKMGPLIEEQRAEMLFHSPENIYGLHSNTDLEGFAKEIIGQTSGFMPKDMCALITDAGANLFPSSNAEVEKVEPEGADSSFSSKVAGDNNESEVSAQKPGKEDLVNALERSKKRNVSALGTPKARSARACVIFFDELDSLAPARGASRDSGGVMDIVVSQILAEIDGLSDSTQDLFIIGASNREDLIDPTLLHPGRFDKFLYVGVNSDASYRERNCESCALREISKAEYNQGDLLDDCETENPLAMVLFQKLDDDSVELVAATVNFSSNNLVGKGGSSDVYRGCLPEGKELAVKILKPSENMVKEFAQEVEIVTTLHHKNTISLSGFCLEGNHLLLVYDFLSRGSLEENLHGNRINYNSFGWQERYRVVVGVAEALDYLHNGCARAVIHRDVKSSNILLSDDFEAQLSNFGLASWAATLCIRRVPRLRPQIRVILKLLHGDEEVTRWEEQEVCASEIHDGFDEEPVRTNIQSHLNLTLLDLEDDAVSISSTEQSVSLEDYLQGRHFFTVISWRVI* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4439 624 ProSiteProfiles Protein kinase domain profile. 375 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4439 624 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 525 615 - -
Psa5g4439 624 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 367 525 - -
Psa5g4439 624 Gene3D Transferase(Phosphotransferase) domain 1 450 527 - -
Psa5g4439 624 CDD AAA 212 313 - -
Psa5g4439 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Psa5g4439 624 Gene3D Phosphorylase Kinase; domain 1 348 449 - -
Psa5g4439 624 Pfam Protein kinase domain 377 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4439 624 Gene3D - 221 314 IPR027417 -
Psa5g4439 624 ProSitePatterns Protein kinases ATP-binding region signature. 381 403 IPR017441 GO:0005524
Psa5g4439 624 PANTHER OS01G0253100 PROTEIN 367 525 IPR045271 GO:0004714|GO:0006468
Psa5g4439 624 PANTHER OS01G0253100 PROTEIN 525 615 IPR045271 GO:0004714|GO:0006468
Psa5g4439 624 MobiDBLite consensus disorder prediction 177 212 - -
Psa5g4439 624 SUPERFAMILY Protein kinase-like (PK-like) 365 527 IPR011009 -
Psa5g4439 624 SMART serkin_6 375 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4439 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 321 IPR027417 -
Psa5g4439 624 Pfam ATPase family associated with various cellular activities (AAA) 219 313 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4439 Psa-Chr5 385701455 385704421 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4439 367 522 Trihelix Transcription Factor Family AT1G23540 43.949 1.33e-38 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Psa5g4439 Pkinase 6.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4439 - - gmx:100815722 276.559