Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4392 ATGAACAACAATGGACTGGTTGGAGTAAACCAGCGAATCATTGAGGGAGAACTTGCAAGAAAGAAGGAACAGTATTTGAACCATGAGGATCTTGCAAAGATTGCTGAATTGTATGGCTCAAACGAGGTTACGTTTAAGATACAGTTGTATGCAGGATCTTCGCCAAAAGATTTTGCTATAGAAGGTGCCATAAACCTAAAGGCAACTTGGGTGATACTAGACAGGCAAATGAAGAAAGATGAAGAGTTTTTCATGCAGAAGCTTTCATGTGGAATATCTAGAGTACTGGGTAAAAATCACATAGAACGCCTGAGAGGAGCTATAGATCTCGCAGTGGAAATACAATGCAACAGTCATGAAACATACGCTGAAAGTTTACCAGAAAGTCCATGCAAAGATGTTTCCAACGGTCCAATCAATGTTGAAGAGGCGGGCCAGATAAATTGCAGGCCCGATAAGGACGAGGGGTGCTCAACATTCATTCTTAGCATGGATGAAACTGATATAAGCAGTAACAAAATCGTAGACAAAATAGGAGATAAGCAATGCCAACAGGGTGAAGAACATATTGAAAAAATGCCTTATGAGGATGATATGGACACAATGCGTGTGGCTAACGGTGATCAAACAAACGATCTTCGTATGAGCCAGGATCAAAGAAAAAATGCCTCAATGTGTTCTATATGCTCTATCTGCAAAACTAGAAGGCCTAATATTGAAGGGCAAAAGGAATTTACCTATGAAGAAGTTGAAGCAGCCACGGATGGATTTTCATTGAAGAACTGTCTCTCTGAAAGTGGAAATCCATTCTCCACTTTCAAAGGCAAGCTGGAGGGAGGGCTGAAAATAGTTGTTAAGCAGCATGAAATAACAAACATTCAAGTTAGGGAAAAAATGATATCAGAACTCCAAACCATCGTCAAAGCTAGACATAATAATGTGGTTATGCTATTGGGTTCATCTACAAAAGATCGTTACATGTTGATTGTATATGAGTATGCATGCAACGGTTCACTTGACATGTATCTATCAAGGGAAAGCTGCAGAAAATTGGCCTGGAGTGAAAGGTTGAGAGTTGCAATAGGCCTCTCCAGAGGTCTAAAGTACCTACATGACAATAACATTATTCATGGAAATATAAAACCGAACAATATTCTTCTAACACATGACTTTAAACCACTGCTTGGAGATTTTGACCTCGGGAAAAAACTCGAACCTAAGAAGTCCTTCAATAACAAAAGCATAGGGAATTATGAATATGCGGCACCAGAGTATCAGGGGAAGGGAAAACTATCAACTAAAACAGATGTATATTCGTTTGGTGTGATTATTTTAGAGTTGATTACAGGACGCAAAGCTACGGATAAAATATCAGGAGAAAAAAAACTTGTTGGATGGGCAAAGCCTCTTCTAGGAGGAAAGAAGTATTCAGAGTTGGTGGATCCTATAATAAGCAACACATATGAAGAAGAACAACTACGATGGTTGGTTAAAGTTACAGCACAATGTCTCAAAAAGAAGCCTAAGGAAAGATTATCCATGAACATGGTAAGCCCCATAATTTTCTCAGATATTCAGGTGGACAATTTTTTGTTAAATCACAAGCATACATTTGGGAAATTTCAGGTTGTTTCTGCATTACAAGGCATTGCAGATAGCGAACAATGCAATATTACAGAAGACTTAACTTTAGCTACATCAGATTCTAGAATTGGGTCTGATATCGATGGTTCACAAGTTACATTACAAGGCATAGCCGACAGAAAACAGGGCAACATGACAGAGAACTTTCCTCAAGTTGTATCAAATCCAAGAGAAACAGATCTCCCGAGTCCGAAAGAGGAGCAGATAGAAAGAATCTCTTTCGAGGAGGAAAATTGGTTAAGAATAAAAGTTGAAAATAATCAATTTTACGTGATAGGCCAGAAAAGTTCTGATAAGTTGAGCCAGACTGATGAATACGTGCAGAACATGCCACAAAGGTTGGACTTAGGAAACATGATAATAAATCAACATATGATGGATCAGACAGTAGTTGCTGAGATGAGTGAATTTGAACAAAATTTGAAGAGCAACCACAGCGAGAATGGAGTTCCAGCACACAAAATTAGTAATAACCGCATGATTGGTCAGGATCAAGAAGAGGAGACGAGCTTTGTTCTAAAGAAAAGAGGCTTACAACCAGTACCTATTAGTGGAATGGTAGATCAAATACAACTCCATGCTAGCTTCACTGAGAATTTACATGATAGACATCAAGACAAAACCATTTTAGAGAAATCAAAATCCTCCGCGTGCTCTATTTGCAAAAGTAAACGACCAAAAATTGGACGAATGAAAGACTTTACTTGTGACGAACTCGTACAAGCTACTAAAGGGTTTTCAGTTGAGAACTCTGTATCAGAAAGTGAAGACGGACCTACTTTCAAAGGGCTTCTAGAGAATAAGGTGAAAATAGTTGTTAAGAAACATCAAATAGCTAGGCCGCTGGAGGAGAAGACATTCAAGTCAGAAGTCCAGTTGTTCACCAATGTTAGACACAAAAATGTGGTCATGCTGTTAGGATTATGTACAGATAAAAGTCAATTGATGATTGCTTATGAGCAAGTGTGCAATGGTTCTCTTGACCATTACCTATCAAGGGGAAATTTCCAGTCATTGACATGGAAGGAAAGAATGAAAATATCAATAGGTACTAGTAGGGGTTTAAAGTATCTACATGAGAATAAGATAATTCATGGAAGTATAAAAGCAAGTAACATTCTTCTAACACATGACTTTGAACCGCTGATTGGAGATTTCGGCTTCGGAAAAGTGAAACTTGAACCAAAGAAGTCCTCCTACAAAGATAAAAGTGGACGAGATTTTGGATATTCAGCACCTGAGTACCTGGAGAATGGGAAATTATCAACTAAAACAGATGTGTACTCCTTTGGAGTGGTTCTTTTAGAACTGATCACCGGTCGGAGGGCAATGGACCAGTTGCAGGGAGGCAAAAACCTCGTTGGATGGGCAAAGCCACTGCTGGGAGGAAAGAAGTATCTACAGTTAGTGGATTCAAAAATCAGTAACACCTATGTAGAAGAACAACTTCAATGGTTGGTCCATGTAACAGAAAAATGTCTCAAAAAGAATCCCAAGGAAAGATATTCAATGAATATGGTTGTATCTGCATTACAAGGCATAACAGAATCAGATGAGTGTTGTGTAATTGAAGATTCTTCTTCTTCAGAAAAATCTTATTTACCAAACGATGAGCCGGCCATCCCCATGACTAAGTCACATGGTCATATGATGGCTGATCCGGTAAGCTTGGAAGCAGAACCGATTGACAGAAACACATACAAGGCAGAGACAAGCTTCATAACAGCAATTACGACTAATAACATGATCAAACAGATCAAGGAAAATCAACACAAAAAAGAAAGCTTCCACATAGAAGAGAATGATACAGAGAAAAAACAACAAAAGATAATCCTGGATGAAAATCTAATCCAAGACATCTATGAAAATGAGAGCTTATTGAATGAGAATCAAGGAGAAACCATTTCGGAGAGTATTTCAAAATCTTCTGTATGCTCAATCTGCAAAAGTAGACGCCCAAATAATGAGTGGCAAAGGAAATTTACTTATGAAGAAATTCAAGCTGCTACAGAAGGATTTTCAATAAAGTATTCTCTATCTGAAGGTGCATATGGACCTGCCTTCAAAGTTCAGCTAGATAATAAGCTGAAAATCGCTATTAAGAAAATTCAAGTCTCAAGCTTGCAGGAAGAGAAAGTGTTTGTGTCAGAAATCCAGGTTCTCGCAAATACTAGACATGAAAACATGATCATGCTTCTTGGTTCATGTATACGAAAAAATCAATTGTTGATCGTATATGAATACGCATGCAACGGTTCCCTTAACCAGTACTTATCAAGTAAGGATAAATCAGTGAATATTACACTTATAACTTGTTCATAG 3966 0.3815 MNNNGLVGVNQRIIEGELARKKEQYLNHEDLAKIAELYGSNEVTFKIQLYAGSSPKDFAIEGAINLKATWVILDRQMKKDEEFFMQKLSCGISRVLGKNHIERLRGAIDLAVEIQCNSHETYAESLPESPCKDVSNGPINVEEAGQINCRPDKDEGCSTFILSMDETDISSNKIVDKIGDKQCQQGEEHIEKMPYEDDMDTMRVANGDQTNDLRMSQDQRKNASMCSICSICKTRRPNIEGQKEFTYEEVEAATDGFSLKNCLSESGNPFSTFKGKLEGGLKIVVKQHEITNIQVREKMISELQTIVKARHNNVVMLLGSSTKDRYMLIVYEYACNGSLDMYLSRESCRKLAWSERLRVAIGLSRGLKYLHDNNIIHGNIKPNNILLTHDFKPLLGDFDLGKKLEPKKSFNNKSIGNYEYAAPEYQGKGKLSTKTDVYSFGVIILELITGRKATDKISGEKKLVGWAKPLLGGKKYSELVDPIISNTYEEEQLRWLVKVTAQCLKKKPKERLSMNMVSPIIFSDIQVDNFLLNHKHTFGKFQVVSALQGIADSEQCNITEDLTLATSDSRIGSDIDGSQVTLQGIADRKQGNMTENFPQVVSNPRETDLPSPKEEQIERISFEEENWLRIKVENNQFYVIGQKSSDKLSQTDEYVQNMPQRLDLGNMIINQHMMDQTVVAEMSEFEQNLKSNHSENGVPAHKISNNRMIGQDQEEETSFVLKKRGLQPVPISGMVDQIQLHASFTENLHDRHQDKTILEKSKSSACSICKSKRPKIGRMKDFTCDELVQATKGFSVENSVSESEDGPTFKGLLENKVKIVVKKHQIARPLEEKTFKSEVQLFTNVRHKNVVMLLGLCTDKSQLMIAYEQVCNGSLDHYLSRGNFQSLTWKERMKISIGTSRGLKYLHENKIIHGSIKASNILLTHDFEPLIGDFGFGKVKLEPKKSSYKDKSGRDFGYSAPEYLENGKLSTKTDVYSFGVVLLELITGRRAMDQLQGGKNLVGWAKPLLGGKKYLQLVDSKISNTYVEEQLQWLVHVTEKCLKKNPKERYSMNMVVSALQGITESDECCVIEDSSSSEKSYLPNDEPAIPMTKSHGHMMADPVSLEAEPIDRNTYKAETSFITAITTNNMIKQIKENQHKKESFHIEENDTEKKQQKIILDENLIQDIYENESLLNENQGETISESISKSSVCSICKSRRPNNEWQRKFTYEEIQAATEGFSIKYSLSEGAYGPAFKVQLDNKLKIAIKKIQVSSLQEEKVFVSEIQVLANTRHENMIMLLGSCIRKNQLLIVYEYACNGSLNQYLSSKDKSVNITLITCS* 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4392 1321 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 538 1151 - -
Psa5g4392 1321 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 216 517 - -
Psa5g4392 1321 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 1179 1308 - -
Psa5g4392 1321 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 28 136 - -
Psa5g4392 1321 Gene3D Phosphorylase Kinase; domain 1 1181 1296 - -
Psa5g4392 1321 Gene3D Phosphorylase Kinase; domain 1 753 868 - -
Psa5g4392 1321 MobiDBLite consensus disorder prediction 587 606 - -
Psa5g4392 1321 ProSiteProfiles Protein kinase domain profile. 794 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4392 1321 SUPERFAMILY Protein kinase-like (PK-like) 779 1066 IPR011009 -
Psa5g4392 1321 SUPERFAMILY Protein kinase-like (PK-like) 241 517 IPR011009 -
Psa5g4392 1321 PANTHER OS01G0253100 PROTEIN 538 1151 IPR045271 GO:0004714|GO:0006468
Psa5g4392 1321 PANTHER OS01G0253100 PROTEIN 1179 1308 IPR045271 GO:0004714|GO:0006468
Psa5g4392 1321 PANTHER OS01G0253100 PROTEIN 28 136 IPR045271 GO:0004714|GO:0006468
Psa5g4392 1321 PANTHER OS01G0253100 PROTEIN 216 517 IPR045271 GO:0004714|GO:0006468
Psa5g4392 1321 SUPERFAMILY Protein kinase-like (PK-like) 1193 1311 IPR011009 -
Psa5g4392 1321 Gene3D Phosphorylase Kinase; domain 1 232 333 - -
Psa5g4392 1321 ProSiteProfiles Protein kinase domain profile. 1221 1321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4392 1321 MobiDBLite consensus disorder prediction 587 614 - -
Psa5g4392 1321 Pfam Protein kinase domain 281 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4392 1321 ProSiteProfiles Protein kinase domain profile. 247 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4392 1321 Pfam Protein tyrosine and serine/threonine kinase 1223 1314 IPR001245 GO:0004672|GO:0006468
Psa5g4392 1321 Pfam Protein tyrosine and serine/threonine kinase 810 1059 IPR001245 GO:0004672|GO:0006468
Psa5g4392 1321 Gene3D Transferase(Phosphotransferase) domain 1 335 524 - -
Psa5g4392 1321 Gene3D Transferase(Phosphotransferase) domain 1 870 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4392 Psa-Chr5 376231771 376242951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4392 245 517 Trihelix Transcription Factor Family AT5G38560 38.112 1.71e-52 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Psa5g4392 PK_Tyr_Ser-Thr 3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4392 - - mtr:MTR_0205s0040 1884.77