Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4385 ATGAGAAATGGAAACAGACCCAACGAACTCGCCAGCTTCTGGATTCAAGCAAACGCGCTTCTCAGAAAGAACTTAACCTTCCAGAAACGAAATGTGAAGACAAACATTAGGCTAATCTTTTTCCCATTTGGCTTGTGTATATTGCTTGTTCTACTTCAAAATCTGCTCAATAATCAATTTGATAAAGCCAAATTTAAGTGCGGATGCATTTGTACCAAGACACAAGGGGAACGATGCTTGGAGAATCAATGCGGGGTTCAGTTTTCGGATTTTGATCAAGTTGGTGCTTGTCCTATTACTAACCCTATTGAATGGACTCCGTTGTTGCAAATCCCTGATCTGCGATACCGCGCTGTTAGAACTGATTTTCTTCAGTATTCGGACTTTCCAAACCCATTGTGTAGAATCAATGGTTCATGTCCCCTCACTATGCTCTTTACTGGGACTAATCAGTCTTTCGGAGAAGTCTTGTCATGGAATATGATACCAAGTACTTTTGGTATAAATAACACCGATGTTATGGGTTTGGCAACAAATGTCATGGGATCGGCATCAGAGACAGAGAACACCAATTTTCTGGAGCCTGCGTTCTTTTCAGATCGTCCCGTTTACTATTTACAAAGTCAGTGCAATAAGAACTCTTCATTCTCCGTTCCTATTCAGATATCAACCACTAGCATACAGCAAGAGTTAAGATGTGCTCAGGCTTTACGGTTATGGCGTAATAGTTCTTCTGAGGTAAACAATGAGCTATATAAAGGTTATAGAAAAGGTAACGCAGAGAGGAAGATCAATGAGATAGCTGCAGGTTATGACTTTCTAAATTCAAATGAGAATATACTTAATGTTAGTATATGGTACAACTCAACTTATAAAAATGACACTGGCTTTGATCTTATTGCTTTGGCAAGGATTCCTCGTTCTGTAAATTTGGTATCAAATGCCTACCTTCAGTTTCTGCTAGGACCTGGTACCAAAATGTTGTTTGAATTTGTAAAAGAAATGCCAAAACCTAAGACCCCAATTAAGTTTGATTTGGCTTCTCTTTTGGGAGGTCTCTTCTTTACATGGGTTATCCTACAACTTTTCCCTGTTGTCCTCACATCATTAGTTTATGAGAAGCAACAAAATTTAAGAATCATGATGAAAATGCATGGTCTCGGTGATGGGCCATATTGGATGATTTCTTATAGTTATTTTCTTGCCATATCATTTATCTACATGCTGTGTTTTGTGATATTTGGCTCAGTTATTGGATTAAAGTTCTTCACAATGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTTCCCTGGCATTTTTATTGGCCTCCCTGTTTTCAAATGTTAAGACTGCCACAGTGATTGCATATATAGGTGTTTTTGGAACAGGGTTATTATCTGGGTTTCTTTTCCAATTTTTTGTTCAAGATAACTCGTTTCCAAGAGGGTGGATCATTGTTATGGAGTTATATCCTGGGTTTGCCTTATATCGTGGATTATATGAATTTTCACAATCTTCTTTTAGTGGTGATACTTTGGGGACTCATGGTATGCGTTGGGGAGATCTCAGTGATAGCACAAATGGCATGAAAGAGGTCTTGATCATCATATTTTTGGAATGGATATTGGTTCTATTCTTCGCTTATTACGTCGATCAAGTTTTGACAACAGGAAGTTGGAAAAGTCCTCATTTGTTCTTGAAAAGATTTCAGAAAAAACCTAGTTCATCTTTTCGGAAGACTAGTATCCAAAGGCAAGGATCTAAGGTGTTTGTTATGACTGAGAAACCAGATATTCGTCAAGAGACGGAGAAGGTGGAGCAACTGCTACTTGAACCAACTGTGAATCATGCAATTGTTTGTGACAAGCTAAGAAAGGTTTATCAAGGGAGGGATGGTAACCCAGAGAAATTTGCAGTGAAAGGGTTGTCGCTTGCTTTGCCTCAAGGGGAATGCTTTGGCATGCTTGGTCCCAACGGAGCTGGGAAGACTTCTTTTATCAACATGATGATAGGTCTTGCGAAGCCAACCTCAGGTACAGCTTTTGTTCAAGGTCTTGACATAAGAACAGATATGAATGGAATATATACAAGCATGGGTGTATGCCCCCAGCATGACTTGCTGTGGGAAATCTTGACAGGAAGAGAGCACCTACTCTTTTATGGAAGACTTAAAAATCTTAAAGGTTCTGATTTAACTCAAGCAGTTGAAGAATCTTTGAAAAGCGTAAACCTTTTTCATGGAGGGGTTGCTGATAAAAAAGCTGGAAAATATAGTGGAGGAATGAAGAGGAGACTTAGCGTTGCAATTTCATTGATCGGAGATCCTAGAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAAGAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGACCGTGCAATCATTCTCACTAGTACGCTTTTTTCTTTCTCATGGTTTTTGAAACATTACCAAGTTGTTGCATTAATTTCTGAGAAGGGATGA 2529 0.3867 MRNGNRPNELASFWIQANALLRKNLTFQKRNVKTNIRLIFFPFGLCILLVLLQNLLNNQFDKAKFKCGCICTKTQGERCLENQCGVQFSDFDQVGACPITNPIEWTPLLQIPDLRYRAVRTDFLQYSDFPNPLCRINGSCPLTMLFTGTNQSFGEVLSWNMIPSTFGINNTDVMGLATNVMGSASETENTNFLEPAFFSDRPVYYLQSQCNKNSSFSVPIQISTTSIQQELRCAQALRLWRNSSSEVNNELYKGYRKGNAERKINEIAAGYDFLNSNENILNVSIWYNSTYKNDTGFDLIALARIPRSVNLVSNAYLQFLLGPGTKMLFEFVKEMPKPKTPIKFDLASLLGGLFFTWVILQLFPVVLTSLVYEKQQNLRIMMKMHGLGDGPYWMISYSYFLAISFIYMLCFVIFGSVIGLKFFTMNDYSIQFVFYFIYINLQISLAFLLASLFSNVKTATVIAYIGVFGTGLLSGFLFQFFVQDNSFPRGWIIVMELYPGFALYRGLYEFSQSSFSGDTLGTHGMRWGDLSDSTNGMKEVLIIIFLEWILVLFFAYYVDQVLTTGSWKSPHLFLKRFQKKPSSSFRKTSIQRQGSKVFVMTEKPDIRQETEKVEQLLLEPTVNHAIVCDKLRKVYQGRDGNPEKFAVKGLSLALPQGECFGMLGPNGAGKTSFINMMIGLAKPTSGTAFVQGLDIRTDMNGIYTSMGVCPQHDLLWEILTGREHLLFYGRLKNLKGSDLTQAVEESLKSVNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRKNLWNVVKRAKQDRAIILTSTLFSFSWFLKHYQVVALISEKG* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4385 842 Pfam ABC transporter 648 792 IPR003439 GO:0005524
Psa5g4385 842 Gene3D - 618 840 IPR027417 -
Psa5g4385 842 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 620 826 IPR027417 -
Psa5g4385 842 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524
Psa5g4385 842 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 841 IPR003439 GO:0005524
Psa5g4385 842 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 9 821 IPR026082 GO:0016021|GO:0055085|GO:0140359
Psa5g4385 842 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 9 821 - -
Psa5g4385 842 CDD ABC_subfamily_A 630 820 - -
Psa5g4385 842 SMART AAA_5 656 840 IPR003593 -
Psa5g4385 842 Pfam ABC-2 family transporter protein 344 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4385 Psa-Chr5 375038425 375046891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4385 642 840 Calmodulin-binding Proteins AT2G36910 24.155 1.54e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4385 - - cam:101495128 1472.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g4385 5 375038425 375046891 Psa5g4385 5 375038425 375046891 ECH