Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4305 ATGAAGATTGCTTTGCATGCTGCAAGAGGGCTTGCTTTTCTTCATGGTGCAGAAAGGCCCATCATATATCGTGACTTTAAGACTTCAAATATCTTGCTAGATGCGGATTTCAATGCAAAGCTTTCAGACTTTGGCCTTGCGAAGGATGGGCCGATGGGGGACCAAACACACGTTTCAACACGAGTGATGGGCACATATGGATATGCTGCTCCGGAGTATGTCATGACTG 229 0.4629 MKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMT 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4305 76 Pfam Protein kinase domain 2 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4305 76 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 1 76 - -
Psa5g4305 76 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Psa5g4305 76 PANTHER OS01G0588500 PROTEIN-RELATED 1 76 - -
Psa5g4305 76 Gene3D Transferase(Phosphotransferase) domain 1 1 76 - -
Psa5g4305 76 ProSiteProfiles Protein kinase domain profile. 1 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4305 76 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4305 Psa-Chr5 356968470 356969215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4305 1 76 Glycoside Hydrolase AT3G07070 68.831 2.04e-31 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa5g4305 Pkinase 2.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4305 - - gmx:100800465 156.762