Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g4297 | ATGGGTAAGGAAAAGGTTCATATTAACATTGTGGTTATTGGCCATGTCGACTTTGGGAAGTCAACTACTACCGATCACTTGATCTACAAGCTTGGAGGTATTGACAAGCGTGTGATTGAGAGATTTGAGAAAGAAGCTGCTGAGATGAACAAGCGTTCATTCAAGTATGCTTGGGTGCTTGACAAGCTCAAGGCTGAAAGGGAAAGAGGTATCACTATTGATATTTCCTTATGGAAGTTTGAGACAACTAAGTACTACTGTACCGTCATTGATGCTCCTAGTCACAAGGATTTTATTAAGAACATGATTACTGGAACATCACAAGCTGATTGTGTTGTTCTCGTAATTGATTCCACTACTGGTGGTTTTGAGGCTGGTGAAGAACCAAAGATTGCGGTAGCTATAATTGATCTTTTTCACTTATTTCCTCCCGCTGCTTCTAAGTTCCTCGATGAACTTATAACCATGACAATTGATTTGGAAGGAGCTCTTCCTCCTTGA | 501 | 0.4032 | MGKEKVHINIVVIGHVDFGKSTTTDHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDISLWKFETTKYYCTVIDAPSHKDFIKNMITGTSQADCVVLVIDSTTGGFEAGEEPKIAVAIIDLFHLFPPAASKFLDELITMTIDLEGALPP* | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g4297 | 166 | Pfam | Tra1 HEAT repeat ring region | 123 | 165 | IPR046805 | - | |
Psa5g4297 | 166 | PRINTS | GTP-binding elongation factor signature | 9 | 22 | IPR000795 | GO:0003924|GO:0005525 | |
Psa5g4297 | 166 | PRINTS | GTP-binding elongation factor signature | 68 | 76 | IPR000795 | GO:0003924|GO:0005525 | |
Psa5g4297 | 166 | PRINTS | GTP-binding elongation factor signature | 88 | 98 | IPR000795 | GO:0003924|GO:0005525 | |
Psa5g4297 | 166 | PRINTS | GTP-binding elongation factor signature | 104 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Psa5g4297 | 166 | PANTHER | TRANSLATION FACTOR | 1 | 126 | - | - | |
Psa5g4297 | 166 | Gene3D | - | 1 | 141 | IPR027417 | - | |
Psa5g4297 | 166 | PANTHER | ELONGATION FACTOR 1-ALPHA 1-RELATED | 1 | 126 | - | - | |
Psa5g4297 | 166 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 61 | 76 | IPR031157 | - | |
Psa5g4297 | 166 | Pfam | Elongation factor Tu GTP binding domain | 6 | 121 | IPR000795 | GO:0003924|GO:0005525 | |
Psa5g4297 | 166 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 5 | 166 | IPR000795 | GO:0003924|GO:0005525 | |
Psa5g4297 | 166 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 3 | 128 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g4297 | Psa-Chr5 | 356578303 | 356579417 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g4297 | 1 | 126 | Eukaryotic Initiation Factors Gene Family | AT1G07930 | 93.651 | 8.19e-83 | 247 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g4297 | K03231 | - | ncol:116247311 | 246.514 |