Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4292 ATGTTGTTTCCATCAATACTGGGAGGAGGTTCTGGTGTTCAACTTTTCCTCTTACCAAACGAGCTGCCTAACAGCTGTTCCTGTTGGTGGATGCTACAGGCTTATAGACATTCCAATGCAACTGCATCAACAGCGGGATCAACAAATTGGATAGCACTCCCATCTACCTTCACCATCTTCAATTTTGGAGAGCAGAAAGTTGTCAAGAACTGGCAGCTATTCTTGTGTGTTTCTGTTGGTCTTTGGGCAGGGCTTATCATTGATTTGTTACTGAATACTATACCAGCAATGCATACAGGGGTTTGCTATTGTTCTGCGCCCTTGTGTCTTGGCCCTTTTTGGTGCCTTTGTGAGCCGTGCTGGTGTTACAACGTCGATTGTCCTGACTCCAAGGTTTTCATCGGTCTGATTGTGGGCGCCATGCTCCTACTGGTTTTCTGCCATGACCATGAAGAGTTCGGAAGTGCAGCATTGAAGATGGTTGAGGAGTTCGCAGGCAATTCAACACATTCCTGGATTGATGGAGGAACTGCGAAACCTGACTATGCCACATGCGTGACAATCTCCACCGCACGCCTTCCATCAAAGAAATGA 594 0.468 MLFPSILGGGSGVQLFLLPNELPNSCSCWWMLQAYRHSNATASTAGSTNWIALPSTFTIFNFGEQKVVKNWQLFLCVSVGLWAGLIIDLLLNTIPAMHTGVCYCSAPLCLGPFWCLCEPCWCYNVDCPDSKVFIGLIVGAMLLLVFCHDHEEFGSAALKMVEEFAGNSTHSWIDGGTAKPDYATCVTISTARLPSKK* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4292 197 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 92 191 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4292 197 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 48 89 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4292 197 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 92 191 - -
Psa5g4292 197 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 48 89 - -
Psa5g4292 197 Pfam Inorganic H+ pyrophosphatase 92 191 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4292 Psa-Chr5 356319601 356321336 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4292 49 87 Primary Pumps ATPases AT1G15690 82.051 3.58e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4292 K23025 - tcc:18588850 81.6481