Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4275 ATGGTAGGATCTAATAGAGAGAACAACATGGCCACTCACATCACTTCCACCACCACCAACAACATTATGCTAACACCAACAACATCACAATTGTTCCTTATGAGACAGAATAATCTCCCTGTAGATTCAAGGGAGTTCCTTGCCTCATCCTCTTCCAAAAAACCAAAAGGTAGACCCTTAGGCTCTAAGAATAGACCCAAACCACCTGTTGTCATTGAGGGAAACCCTAACATATTAATGGAACCCATTTTCATTCAGATTCCTGCTGGAAATGATGTGGTTGAGACACTCGTCAACTTGGCTCAAAGTCATCAGGCTAATATCACTGTGTTAAGTGGTTCTGGTCTTGTCTCTAATGTTACCCTTGTGCACCCCATATCTCGTGTCCCTACTTTCCCTATCAAAGGAACATTGCATATGGCATTTCTCTCTGGAACTTATGTGAATTCCAACCTTGTTGGTATTTCTCACCAATTTATTGCTGACCAATCACATTCGTCATTTTCCATTTATTTTTATGGAGATCGAAGACAGGTGATTGGTGGTGTTATTGGTGGGAAGATAGAGGCTGTCGGTGTTGTTTCCATTAGAGCCACTCTTTTTAAAAATCCGGAGTTTCATAGGGTGGCAATTATTAACGGAGTTTTTCAAGAAGTCGAAGAGAATGACACAATGTATGTTGGCGGTGTCATTCCTAATGTTGATCAAGTTACATATGAATCCACAATTAACAACAATAATGGAACTCATGTGCGAGACATCAATGTTATTGGTTCTAGTTCAGCTCAACCAGATTATCAAATGATTCACCCTTCTCTTCCACCAAATTTGAATTTCATGCAGTGGAATCACAACCGCTCCACCCGTAATGATCATTACTAG 882 0.4036 MVGSNRENNMATHITSTTTNNIMLTPTTSQLFLMRQNNLPVDSREFLASSSSKKPKGRPLGSKNRPKPPVVIEGNPNILMEPIFIQIPAGNDVVETLVNLAQSHQANITVLSGSGLVSNVTLVHPISRVPTFPIKGTLHMAFLSGTYVNSNLVGISHQFIADQSHSSFSIYFYGDRRQVIGGVIGGKIEAVGVVSIRATLFKNPEFHRVAIINGVFQEVEENDTMYVGGVIPNVDQVTYESTINNNNGTHVRDINVIGSSSAQPDYQMIHPSLPPNLNFMQWNHNRSTRNDHY* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4275 293 MobiDBLite consensus disorder prediction 45 69 - -
Psa5g4275 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 202 IPR005175 -
Psa5g4275 293 CDD DUF296 82 188 IPR005175 -
Psa5g4275 293 ProSiteProfiles PPC domain profile profile. 76 222 IPR005175 -
Psa5g4275 293 Gene3D - 81 246 - -
Psa5g4275 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 209 - -
Psa5g4275 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 282 - -
Psa5g4275 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 18 282 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4275 Psa-Chr5 351761827 351763060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4275 53 209 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.545 3.17e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4275 - - cam:101509190 222.631