Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4274 ATGGGATCCGAAGCTATGGTTCCAGAATGGGCATCGGAGCTCTGCATAATGGGAATCGACGAAGCCGGAAGAGGTCCCGTTCTTCGTCCTATGGTCTATGGCTGTTTATACTGTCCTCTCTCCTACAAGAAAACCCTAGCTACTTTGAGTTTCGCCGCGGTTGGTGAGGATGAATTTGGATATATGCTTGCTGATATACTCAAGGAAAATAATGTAAACAACCAAGGGATGCGTTTTGACCCTGGTGCACGTACTGCCTTAGCATTTGTTACACTGAGGAGTGACGGAGAGCGAGAGTTCATGTTTTATCGTAATTCCAGTGCTGATATGCTGCTCCAAGAAGATGAACTAGACTTAGACTTAATTCAGAAAGATAGTGCTAGAGAAGGGATTTTGAGTATATGGGAGACTGCAGATATCATCAAGGAGTTTAGTGGTAGAGTGAAGGGAATGAAGGTGGATGCAGTTGACACAACCGGAGCTGGTGACGCTGTTGTGGCCGGAATTATTATCACAATTAGCTACAGATCTTTCATTACTTCACTGGTGCAAGTATAG 558 0.4462 MGSEAMVPEWASELCIMGIDEAGRGPVLRPMVYGCLYCPLSYKKTLATLSFAAVGEDEFGYMLADILKENNVNNQGMRFDPGARTALAFVTLRSDGEREFMFYRNSSADMLLQEDELDLDLIQKDSAREGILSIWETADIIKEFSGRVKGMKVDAVDTTGAGDAVVAGIIITISYRSFITSLVQV* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4274 185 PANTHER HEXOKINASE FAMILY MEMBER 142 171 - -
Psa5g4274 185 PANTHER HEXOKINASE FAMILY MEMBER 53 126 - -
Psa5g4274 185 Pfam pfkB family carbohydrate kinase 51 124 IPR011611 -
Psa5g4274 185 Pfam Ribonuclease HII 17 51 IPR024567 GO:0004523
Psa5g4274 185 PANTHER PUTATIVE-RELATED 142 171 - -
Psa5g4274 185 PANTHER PUTATIVE-RELATED 53 126 - -
Psa5g4274 185 SUPERFAMILY Ribonuclease H-like 10 42 IPR012337 -
Psa5g4274 185 Gene3D - 14 49 IPR036397 GO:0003676
Psa5g4274 185 Gene3D - 51 125 IPR029056 -
Psa5g4274 185 Gene3D - 85 102 IPR023314 -
Psa5g4274 185 SUPERFAMILY Ribokinase-like 50 172 IPR029056 -
Psa5g4274 185 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 157 170 IPR002173 GO:0016773
Psa5g4274 185 Gene3D - 134 181 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4274 Psa-Chr5 351601828 351604115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4274 1 52 Core DNA Replication Machinery Family AT2G25100 71.154 2.87e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4274 K00847 - gmx:100797023 172.555