Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4239 GAAACACTAGATTCTAGTGAAATACCCTTTTTAGACAGAACAATTCTCAAATTTTCACACACCCCATTTGAACCATGTTATGAACACATAGAGTTAAAGCCACCACCATTCATTCTTGGAAGATCTGACGCAAATATTGAAAGAAACAAGAGTATGAGAGCTGAATTATTGAAACTCACAGCAGAACAAGTTGAAAAGTTGAAGAAAAAGGCTAATGAATTTGATATTCCAAAAGGGTCAAGACCTTATAGTAGATTTGAAGCTATAAGTGCACATATATGGAAAAGTGCATCTAAAGCACGTGATCTTGAAAAGAAACAAGAAAGTGTTTTAAGATTCAATGTTGAAATCAGGAATAGAATAATTCCAAATCTTCCAGATTATTACTATGGGAATGCTTTGATTCAAACTTCAGCAAAAGGGTATATTGGAGAAATCACATCAAAGCGGTTGAGTTATGTTGCAAAGAAGATAAGGGAAGCACATGAGATGATAACAAATGAGTATATAAGGTCACAGATTGATGTTATTCGGGGTTTTGAGCATTTGGAAGATGCAAGGAAATTGTTTATAGGCAGTGAAGGTAAGGATGCTACATATTTTGGGAATCCAAATCTTCATCTAACAAGTTGGATAAATTTGCCTACATACAAAGCTGATTTTGGGTGGGGAAAACCATTTTACTTTGGTACTGGATATGTTTCTAGACATGACAGGGCATGGATTCAATTGGTTCCTGACAGAGATGGTTCTGTTATTGTGTGTATGCATTTTCAGGTTGAATTGATGGAGCTTTTCAAGAAGTTTTTCTATGAGGATTTATATGACTTGTTCACATCAGCACGATTGTGA 852 0.3509 ETLDSSEIPFLDRTILKFSHTPFEPCYEHIELKPPPFILGRSDANIERNKSMRAELLKLTAEQVEKLKKKANEFDIPKGSRPYSRFEAISAHIWKSASKARDLEKKQESVLRFNVEIRNRIIPNLPDYYYGNALIQTSAKGYIGEITSKRLSYVAKKIREAHEMITNEYIRSQIDVIRGFEHLEDARKLFIGSEGKDATYFGNPNLHLTSWINLPTYKADFGWGKPFYFGTGYVSRHDRAWIQLVPDRDGSVIVCMHFQVELMELFKKFFYEDLYDLFTSARL* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4239 283 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 274 - -
Psa5g4239 283 Pfam Transferase family 6 272 - -
Psa5g4239 283 Gene3D - 41 273 IPR023213 -
Psa5g4239 283 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4239 Psa-Chr5 341494595 341495607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4239 3 272 Monolignol Biosynthesis Gene Families AT5G48930 33.333 3.68e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4239 K13065 - gmx:100778626 339.732