Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4217 ATGTCTTCCAACTTTTCTTTGCAAGTGGAATTATCGAAGAAAACTTCAGTTTGGGGTTTAAGGCTATGGGTTTTGATCGGAATAGGCGTTGGTGCGTTTATAGTTCTTATTCTTTGTATATTATCTACATGGATACTGTTTCGGAGGAAAACAAGGAGATCCGTAAACGTAGACAAGTACTCGTTATCACAAATACCTCACGACTCGAAGGATATCAAAGTTGACAAAGTTGGAGTGAATCCGTCTCATGATCAAGTAGAGAGTGTGTCTGTTCATGTTCATGATAATGCGGCAAACGATAAGAATTCAGATTCAGATAAGTTGTTTGTTCATTTGAGCAAATCAAGCGATCCTGATAATGTTAGTCGGTGTAGCTCGGTTTATCATCACGATAGAGGGTTAAGTTTGATGTCAATAGAAGATGGAAACTTTGGACCTGTTAAGAAGCAGTATACGGTAACTGCGTCTCCTCTGGCTGGCTTGCCCGAGGTTTCTCATCTTGGGTGGGGCCATTGGTTCACACTAAGAGATCTTGAGCTTTCGACTAACCGTTTTGCCGCGGAGAACGTGATTGGCGAAGGCGGATACGGAGTTGTCTACAAGGGAAGATTGATCAATGGGTCTGAGGTGGCAGTGAAGAGACTTTTTAACAACTTGGGACAGGCAGAGAAAGAATTCAGAGTTGAAGTCGATGCTATAGGCCATGTCAGACATAAAAACCTTGTGCGCTTACTTGGATTTTGCATAGAAGGAGTTCACAGATTGCTCGTGTATGAGTATGTGAACAATGGTAACTTAGAACAATGGTTGCATGGGGCAATGAGCCAACATGGGGTACTCACATGGGAAGCTCGCATGAAAGTTATTCTCGGCACAGCCAAAGCGCTTGCTTACTTACACGAAGCAATAGAACCAAAAGTTGTTCACCGGGATATAAAGTCTAGCAACATTTTGATTGATAGCGAGTTTAACGGAAAGGTTTCTGATTTTGGTTTAGCCAAACTTTTAGATTCAGGAGAAAGTCACATAACTACCAGAGTAATGGGAACATTTGGTTACGTTGCACCAGAATATGCGAACTCCGGCTTGTTAAATGAGAAAAGCGACATTTACAGCTTTGGTGTTCTCCTACTCGAAGCAATTACCGGAAGAGACCCTGTAGACTATACACGTCCTACAAACGAGGTGAATCTTGTTGAGTGGCTCAAGATGATGGTGGGGACAAGGAGAGCTGAGGAAGTTGTGGACTCGAGCATTGAAGCGAAACCGCCGACACGTGCTTTAAAGCGTGCTCTTCTTGTTGCATTTAGGTGTGTCGATCCTGAGGCTGAGAAGAGACCTAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCCGAAGAATATCCGTTCAGAGAGGATCGAAGAAATAGAAAGAGTCGCGGCGTCAGCATGGATATTGAATCTATAAAGGATAACTCTGGTCCTTCTTATACCGATAAGATGAAAGGTTCCGAAGAATGCACAGTTGAGACACCTGAAAGGTTCTAA 1527 0.4309 MSSNFSLQVELSKKTSVWGLRLWVLIGIGVGAFIVLILCILSTWILFRRKTRRSVNVDKYSLSQIPHDSKDIKVDKVGVNPSHDQVESVSVHVHDNAANDKNSDSDKLFVHLSKSSDPDNVSRCSSVYHHDRGLSLMSIEDGNFGPVKKQYTVTASPLAGLPEVSHLGWGHWFTLRDLELSTNRFAAENVIGEGGYGVVYKGRLINGSEVAVKRLFNNLGQAEKEFRVEVDAIGHVRHKNLVRLLGFCIEGVHRLLVYEYVNNGNLEQWLHGAMSQHGVLTWEARMKVILGTAKALAYLHEAIEPKVVHRDIKSSNILIDSEFNGKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAITGRDPVDYTRPTNEVNLVEWLKMMVGTRRAEEVVDSSIEAKPPTRALKRALLVAFRCVDPEAEKRPKMSQVVRMLEAEEYPFREDRRNRKSRGVSMDIESIKDNSGPSYTDKMKGSEECTVETPERF* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4217 508 PANTHER RECEPTOR-LIKE KINASE PLANT 2 501 - -
Psa5g4217 508 SMART serkin_6 185 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4217 508 Pfam Protein kinase domain 187 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4217 508 MobiDBLite consensus disorder prediction 464 478 - -
Psa5g4217 508 Gene3D Phosphorylase Kinase; domain 1 164 260 - -
Psa5g4217 508 SUPERFAMILY Protein kinase-like (PK-like) 169 459 IPR011009 -
Psa5g4217 508 PANTHER OS01G0323000 PROTEIN 2 501 - -
Psa5g4217 508 Gene3D Transferase(Phosphotransferase) domain 1 261 473 - -
Psa5g4217 508 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Psa5g4217 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Psa5g4217 508 MobiDBLite consensus disorder prediction 464 508 - -
Psa5g4217 508 ProSiteProfiles Protein kinase domain profile. 185 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4217 508 CDD STKc_IRAK 191 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4217 Psa-Chr5 337812755 337818197 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4217 16 459 Trihelix Transcription Factor Family AT1G70460 40.929 6.77e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Psa5g4217 Pkinase 3.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4217 - - gmx:100813931 801.971