Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4206 ATGCAGCTCTTGTTTAACCGTGAGCTTGTTCTTGTGGAGTATGGTGGGTTTGTTCGGAAATGCCGCATCTCAAAAGTATCTCTGGCCTCGATTGTTCTCGCCAGGATACTGATTAAGCCAGAAGAAATTGCCACCATGCCAGCTGTGGCTGGCGCATTTGGATATATTGCTCCAGAATATGCTCAAACAATTAGAGTCAATGAGAAGATAGATGTTTACAGCTTTGAAGTAGTTCTATTGGAACTGACAACTGGAAAAGAAACTAATCTAAAAACTGCCAGCCGATAG 288 0.4271 MQLLFNRELVLVEYGGFVRKCRISKVSLASIVLARILIKPEEIATMPAVAGAFGYIAPEYAQTIRVNEKIDVYSFEVVLLELTTGKETNLKTASR* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4206 95 Gene3D Transferase(Phosphotransferase) domain 1 8 93 - -
Psa5g4206 95 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4206 95 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 28 90 - -
Psa5g4206 95 SUPERFAMILY Protein kinase-like (PK-like) 33 86 IPR011009 -
Psa5g4206 95 Pfam Protein tyrosine and serine/threonine kinase 26 88 IPR001245 GO:0004672|GO:0006468
Psa5g4206 95 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 28 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4206 Psa-Chr5 335983772 335984967 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4206 28 89 Receptor kinase-like Gene Family AT5G25930 66.667 7.14e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa5g4206 PK_Tyr_Ser-Thr 2.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4206 - K00924 gmx:100785907 98.2117