Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4205 ATGCAGCTCTTGTTTAACCGTGCGCTTGTTCTTGTGGAGTATGGTGGGTTTGTTCGGAAATGCTGCATCTCAAAAGTATCTCTGGCCTCGATTGTGATACTGATTAAGCCAAACGAACTTACCACCATGCCAGCTGTGGCTGGCGCATTTGGATATATTGCTCCAGAATATGCTCAAACAATTAGAGTCAATGAGAAGATAGATGTTTACAGCTTTGAAGTAGTTCTATTGGAACTGACAACTGGAAAAGAAACTAATCTAAAAACTGCCAGCCGGTAG 279 0.4229 MQLLFNRALVLVEYGGFVRKCCISKVSLASIVILIKPNELTTMPAVAGAFGYIAPEYAQTIRVNEKIDVYSFEVVLLELTTGKETNLKTASR* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4205 92 Gene3D Transferase(Phosphotransferase) domain 1 8 91 - -
Psa5g4205 92 ProSiteProfiles Protein kinase domain profile. 1 92 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g4205 92 Pfam Protein tyrosine and serine/threonine kinase 23 85 IPR001245 GO:0004672|GO:0006468
Psa5g4205 92 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 27 87 - -
Psa5g4205 92 SUPERFAMILY Protein kinase-like (PK-like) 39 83 IPR011009 -
Psa5g4205 92 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 27 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4205 Psa-Chr5 335941768 335942963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4205 33 86 Receptor kinase-like Gene Family AT5G25930 72.727 1.29e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa5g4205 PK_Tyr_Ser-Thr 3.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4205 - K00924 gmx:100785907 90.8929