Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4187 ATGGGAGGTGAATCTGTGGGAACTCCAGCCTCTAGTAAAGGCATTGGTTCAACTACTGGTCTTGAACACGTTCAAGGGACTGGAGAGGGTCAGAAAAAGAGAGGGAGAAGCCCAGCTGACAAAGAAAGAAAACGACTAAAGAGGTTGCTGAGGAACCAAGTTTCAGCTCAGCAAGCAAGGGAGAGGAAAAAGGCTTACTTCAGTAATTTGGAAACAAGAGTCAATGACTTGGAGAAGAAGAATTTAGAGCTTAAAGAAAAACTTTCAAATTTGCAAAATGAGAATCAAATTCTAAGACATATATTGAAGAACATGACTGCGAGCAGGGGAGGAGGCAATAGTGGTACCAACAATGCTGAATGA 363 0.4215 MGGESVGTPASSKGIGSTTGLEHVQGTGEGQKKRGRSPADKERKRLKRLLRNQVSAQQARERKKAYFSNLETRVNDLEKKNLELKEKLSNLQNENQILRHILKNMTASRGGGNSGTNNAE* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4187 120 MobiDBLite consensus disorder prediction 10 25 - -
Psa5g4187 120 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 47 62 IPR004827 GO:0003700|GO:0006355
Psa5g4187 120 SUPERFAMILY Leucine zipper domain 44 102 IPR046347 GO:0003700|GO:0006355
Psa5g4187 120 MobiDBLite consensus disorder prediction 1 62 - -
Psa5g4187 120 Gene3D Single helix bin 63 104 - -
Psa5g4187 120 SMART brlzneu 40 104 IPR004827 GO:0003700|GO:0006355
Psa5g4187 120 CDD bZIP_HY5-like 45 96 - -
Psa5g4187 120 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 42 105 IPR004827 GO:0003700|GO:0006355
Psa5g4187 120 Coils Coil 39 108 - -
Psa5g4187 120 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 3 110 - -
Psa5g4187 120 Coils Coil 118 120 - -
Psa5g4187 120 Pfam bZIP transcription factor 41 101 IPR004827 GO:0003700|GO:0006355
Psa5g4187 120 MobiDBLite consensus disorder prediction 27 49 - -
Psa5g4187 120 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 3 110 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4187 Psa-Chr5 332145431 332145973 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4187 1 101 bZIP Transcription Factor Family AT5G11260 68.627 6.77e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g4187 bZIP_1 1.2e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4187 K16241 - gmx:547806 155.606