Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g4186 | ATGTCTTCTTCACTTGTAAAGATTGTAAAGATCCAAGACCAACACCACCTCCCCAAAGATCTTCGTAATCTCTCAATCAAAGATCTGGGTGAAAAGGTGAGTGAAGAAGAAGAGAATCATCCTGTAGGATTTGGAAAGCATGGCGGAATATGCGCAATTTGCTTAGAGGTGATAGTGCTACAAGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATCCTTCATTGGGCCACATACAGTAAGAAAGTTACCTGCCCTCAGTGCAAACATCCATTTGAGTTCCTTGCTGTTCATCGCACTCTTGATGGAAGTATTCAAGATTACATGTTTGATGAAAGTGTTTGCCTACTACTTCGGGCCAAGTGGTTCAAGCCTTTAACTGTTGAAGAGTGTGCAGTTGTTGAAGAAGATATCTATGAAGAGATAGAAGACTATTATAATCAGTATGAAGAAGCTGACGACGATCTAGATGACGACGAGGCTTATTATGGTGCTTCAGCAAATGTACGGCTTGGCAACCGTAGATGGGGAGACAACGGTTTTGTAAGGGCTGGGCGTCAAGAAGCCAGGCCAGTCCATCGACCAAGCTTCCATGATTCAGGAGCAAGTTCATCTCAGGAGCCAAAGAAGAAAGAACAAGAGTGTCCAAAAGTTATGACAGGGAGACGGGCAAAGAGGGCACTGAAAAGGGAAGCTGCTAATAAGGCAGCTGAAGCCAAGCACCAGAAGCATTTGGATAGGTTGGGTAGGAACTAG | 771 | 0.4423 | MSSSLVKIVKIQDQHHLPKDLRNLSIKDLGEKVSEEEENHPVGFGKHGGICAICLEVIVLQETALVKGCEHAYCVTCILHWATYSKKVTCPQCKHPFEFLAVHRTLDGSIQDYMFDESVCLLLRAKWFKPLTVEECAVVEEDIYEEIEDYYNQYEEADDDLDDDEAYYGASANVRLGNRRWGDNGFVRAGRQEARPVHRPSFHDSGASSSQEPKKKEQECPKVMTGRRAKRALKREAANKAAEAKHQKHLDRLGRN* | 257 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g4186 | 256 | MobiDBLite | consensus disorder prediction | 209 | 256 | - | - | |
Psa5g4186 | 256 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 14 | 255 | - | - | |
Psa5g4186 | 256 | Coils | Coil | 140 | 160 | - | - | |
Psa5g4186 | 256 | Pfam | Ring finger domain | 51 | 94 | IPR001841 | - | |
Psa5g4186 | 256 | SUPERFAMILY | RING/U-box | 50 | 100 | - | - | |
Psa5g4186 | 256 | ProSiteProfiles | Zinc finger RING-type profile. | 51 | 94 | IPR001841 | - | |
Psa5g4186 | 256 | MobiDBLite | consensus disorder prediction | 192 | 256 | - | - | |
Psa5g4186 | 256 | SMART | ring_2 | 51 | 93 | IPR001841 | - | |
Psa5g4186 | 256 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 30 | 118 | IPR013083 | - | |
Psa5g4186 | 256 | ProSitePatterns | Zinc finger RING-type signature. | 69 | 78 | IPR017907 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g4186 | 5 | 255 | C3H Transcription Factor Family | AT5G19430 | 52.692 | 6.29e-79 | 237 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g4186 | - | - | gmx:100785472 | 324.324 |