Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4186 ATGTCTTCTTCACTTGTAAAGATTGTAAAGATCCAAGACCAACACCACCTCCCCAAAGATCTTCGTAATCTCTCAATCAAAGATCTGGGTGAAAAGGTGAGTGAAGAAGAAGAGAATCATCCTGTAGGATTTGGAAAGCATGGCGGAATATGCGCAATTTGCTTAGAGGTGATAGTGCTACAAGAAACTGCTCTTGTAAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATCCTTCATTGGGCCACATACAGTAAGAAAGTTACCTGCCCTCAGTGCAAACATCCATTTGAGTTCCTTGCTGTTCATCGCACTCTTGATGGAAGTATTCAAGATTACATGTTTGATGAAAGTGTTTGCCTACTACTTCGGGCCAAGTGGTTCAAGCCTTTAACTGTTGAAGAGTGTGCAGTTGTTGAAGAAGATATCTATGAAGAGATAGAAGACTATTATAATCAGTATGAAGAAGCTGACGACGATCTAGATGACGACGAGGCTTATTATGGTGCTTCAGCAAATGTACGGCTTGGCAACCGTAGATGGGGAGACAACGGTTTTGTAAGGGCTGGGCGTCAAGAAGCCAGGCCAGTCCATCGACCAAGCTTCCATGATTCAGGAGCAAGTTCATCTCAGGAGCCAAAGAAGAAAGAACAAGAGTGTCCAAAAGTTATGACAGGGAGACGGGCAAAGAGGGCACTGAAAAGGGAAGCTGCTAATAAGGCAGCTGAAGCCAAGCACCAGAAGCATTTGGATAGGTTGGGTAGGAACTAG 771 0.4423 MSSSLVKIVKIQDQHHLPKDLRNLSIKDLGEKVSEEEENHPVGFGKHGGICAICLEVIVLQETALVKGCEHAYCVTCILHWATYSKKVTCPQCKHPFEFLAVHRTLDGSIQDYMFDESVCLLLRAKWFKPLTVEECAVVEEDIYEEIEDYYNQYEEADDDLDDDEAYYGASANVRLGNRRWGDNGFVRAGRQEARPVHRPSFHDSGASSSQEPKKKEQECPKVMTGRRAKRALKREAANKAAEAKHQKHLDRLGRN* 257
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4186 256 MobiDBLite consensus disorder prediction 209 256 - -
Psa5g4186 256 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 14 255 - -
Psa5g4186 256 Coils Coil 140 160 - -
Psa5g4186 256 Pfam Ring finger domain 51 94 IPR001841 -
Psa5g4186 256 SUPERFAMILY RING/U-box 50 100 - -
Psa5g4186 256 ProSiteProfiles Zinc finger RING-type profile. 51 94 IPR001841 -
Psa5g4186 256 MobiDBLite consensus disorder prediction 192 256 - -
Psa5g4186 256 SMART ring_2 51 93 IPR001841 -
Psa5g4186 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 30 118 IPR013083 -
Psa5g4186 256 ProSitePatterns Zinc finger RING-type signature. 69 78 IPR017907 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4186 5 255 C3H Transcription Factor Family AT5G19430 52.692 6.29e-79 237
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4186 - - gmx:100785472 324.324