Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4176 ATGCGACTTCGCCCCCTATTTTCTCCCCGAAAATCACAGCGATTCGCGAATGTGCACCGTGTCTTCGGCGCAAGCAATGTGGCTAAGCTCTTAAAGAGCTTAACGTGGCTGACCGCGAAGACGCGGAGTTGTCCAGTTACAATTCTAATCCTCAAGCTATGCAGTTCTTGTTTGGGAATCCTGATGCTTGGAGGAGCGGGGATGGTTACTCGCGATGTTCAGCAAGAACAAGAGCTTCTTGAAGCTCAGCAGATAGTTGCCTCTCAGCAAGATTATTTGCTTAGATTTAGCGGCCTTCATGTAGGTGGCAGTGGTGGTGGTACTGCTGTTGTTTCTGGTCATGCTGATATGGCTCATTCGTTGGGTATAGGAAGCTTTGAAAATGGAGGTAGCGGCGGAGGAAGTAGCAGCGGCTGTGGTTATTATCAGATTCAGCAACAACAACAGGGAGAGCCACAACAGCAACACCAGGATTATAATCCTCATGTTGGTGTTGCTGCTGCGGTGAATCAAACTGAGACGCCGGGTCTGTTATCTCCTCAGAATCAGGAGAATGGTGGTGAGGATGGTAGGAGTGCTGGTAGCACTCATCGTTCTAGTTGA 603 0.4925 MRLRPLFSPRKSQRFANVHRVFGASNVAKLLKSLTWLTAKTRSCPVTILILKLCSSCLGILMLGGAGMVTRDVQQEQELLEAQQIVASQQDYLLRFSGLHVGGSGGGTAVVSGHADMAHSLGIGSFENGGSGGGSSSGCGYYQIQQQQQGEPQQQHQDYNPHVGVAAAVNQTETPGLLSPQNQENGGEDGRSAGSTHRSS* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4176 200 MobiDBLite consensus disorder prediction 172 200 - -
Psa5g4176 200 Pfam Lateral organ boundaries (LOB) domain 3 35 IPR004883 -
Psa5g4176 200 MobiDBLite consensus disorder prediction 145 200 - -
Psa5g4176 200 MobiDBLite consensus disorder prediction 145 160 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4176 5 34 AS2 family AT1G65620 66.667 1.99e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Psa5g4176 LOB 4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4176 - - mtr:MTR_3g452660 67.781