Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4155 ATGAGTTGTTTTCCATGTTGTGCTTCACAAGAGAGAATCAACAAGAAATCATTGAAGAAAAGTATTAAGGAATACCATGAAGCAAAAACTTTATCCTCATTTGCTAACATCTCTTTTAAAACTGATAGTGGCAAGAGAAGGTTCATAGCAGATGAGATAGCAAAGCTTGGAAAAGGAAATGTTACCTCTAAGGTATTTTCGTATCGCGATCTATGCAGCGCGACTCAGAATTTTCATCCTCCAAACATGATTGGAGAAGGAGGTTTTGGAAGAGTATACAAAGGGAACATCAAAAGCACAAATCAAGTTGTTGCGGTGAAGCAGCTTGACAGAAATGGATTTCAAGGGAACAGAGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCATCATCAAAACCTCGTGAATTTAGTAGGTTATTGCGCCGAAGGTGACCAGAGGATTTTGGTATATGAATTCATGGAAAATGGTTCCTTAGAAGATCACTTGCTTGATGTAACTCCTGATAGAAAGCCTTTCGGAGTTGTGTTCTTGGAGATTATTACGGGAAGAAGAGTCATCGACAATTCGAGACCGTCAGAAGAACAAAATTTAATCATTTGGGCACAACCTCTTCTAAAAGATAAAAATAAATTCACAAAAATGGCAGATCCATTGCTAGGAGATAACTATCCTATAAAGGGTCTATATCAAGCTCTAGCTGTAGCAGCAATGTGTCTTCAAGAGGAAGCTGATACACGGCCGTTAATCAGCGATGTAGTTACTGCTCTCGAATTTCTAGCCAACAAGAAAGAAGACGATGGAGAAAAACTAACAAAAGAAGAGATTTTTGCTTCTCAAGGTGGAAATCATGAATCTAATGTAAATAATGACAATGAAGATGAAGATGAGGATGGTGATGACAACGACGACGATGAAGATGAAGATGAGGATGACGATGACGATGACGAAGAGGATGGTGATAATGATAATGATAATAAGAAAGTTCATATTAGATATAGTGAATGA 1011 0.3749 MSCFPCCASQERINKKSLKKSIKEYHEAKTLSSFANISFKTDSGKRRFIADEIAKLGKGNVTSKVFSYRDLCSATQNFHPPNMIGEGGFGRVYKGNIKSTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHQNLVNLVGYCAEGDQRILVYEFMENGSLEDHLLDVTPDRKPFGVVFLEIITGRRVIDNSRPSEEQNLIIWAQPLLKDKNKFTKMADPLLGDNYPIKGLYQALAVAAMCLQEEADTRPLISDVVTALEFLANKKEDDGEKLTKEEIFASQGGNHESNVNNDNEDEDEDGDDNDDDEDEDEDDDDDDEEDGDNDNDNKKVHIRYSE* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4155 336 MobiDBLite consensus disorder prediction 291 323 - -
Psa5g4155 336 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Psa5g4155 336 SUPERFAMILY Protein kinase-like (PK-like) 64 264 IPR011009 -
Psa5g4155 336 Gene3D Transferase(Phosphotransferase) domain 1 173 285 - -
Psa5g4155 336 MobiDBLite consensus disorder prediction 277 336 - -
Psa5g4155 336 PANTHER OS07G0668900 PROTEIN 1 173 - -
Psa5g4155 336 PANTHER OS07G0668900 PROTEIN 174 281 - -
Psa5g4155 336 Pfam Protein tyrosine and serine/threonine kinase 82 167 IPR001245 GO:0004672|GO:0006468
Psa5g4155 336 PANTHER RECEPTOR SERINE/THREONINE KINASE 174 281 - -
Psa5g4155 336 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 173 - -
Psa5g4155 336 Gene3D Phosphorylase Kinase; domain 1 63 154 - -
Psa5g4155 336 ProSiteProfiles Protein kinase domain profile. 78 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4155 Psa-Chr5 329455072 329456850 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4155 135 263 Glycoside Hydrolase AT3G07070 51.163 7.05e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Psa5g4155 PK_Tyr_Ser-Thr 2.8e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4155 - - cam:101510927 312.383