Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4076 ATGGAAGAATCTGAAGTTCTAGGCTTTAAAGAGCCAAGGAAAATATTGATTGATTGGATGGTAAATGGAAGGGATGAGCGCACTATAGTTTATGTGGTAGGAATGGGAGGGCAAGGAAAAACCCCTCTTGCTAAGAAAGTTTTTGACAGCAAGGATCTAGTCCGCCACTTCGATTCTCGTGTTTGGATCACAGTCTCTCAATCATATAATGTTGAAGACTTGTTGAGGGAGATGCTGATAAAGTTTTCCAAAGAAAAAGGAGATGGTGCTCCTAGGGATATTTCTCAAATGGATCGAGGGTCATTCACCGAACAAGTGCGAAACTACTTGCAGCAAAAGAGGTACATTGTTGTGTTTGATGATGTTTGGAGTTTACATTTTTGGGATGATATTCAATTTACTGTAATTGGTAATAAAAAAGGAAGTAGGATATTTATCACAGCTAGGAACCAAAATGTTGTGGTTTCTTGTAAAAAATCTTCTTTCACTGAGATGCTTGAAATGCAACCTCTAACTCAAGAACAATCTCTTGAGCTGTTCAATAAGAAGGCATTCAAATTTGACTATGACGGGTGCTATCCAAAAGAGCTTACTTCTATAGCCAATGAAATTGTTAAAAAATGTAATGGCTTACCACTAGCAATTGTTTCCATTGGTGGTCTTTTGTCTACAAGAGAGAAAACTGGTTTTGAGTGGAACAAGACATTAAGTCAAGACTATTCTCTCTCTGCGTCGAATAGCGTCTGA 747 0.3802 MEESEVLGFKEPRKILIDWMVNGRDERTIVYVVGMGGQGKTPLAKKVFDSKDLVRHFDSRVWITVSQSYNVEDLLREMLIKFSKEKGDGAPRDISQMDRGSFTEQVRNYLQQKRYIVVFDDVWSLHFWDDIQFTVIGNKKGSRIFITARNQNVVVSCKKSSFTEMLEMQPLTQEQSLELFNKKAFKFDYDGCYPKELTSIANEIVKKCNGLPLAIVSIGGLLSTREKTGFEWNKTLSQDYSLSASNSV* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4076 248 Gene3D - 170 247 IPR042197 -
Psa5g4076 248 PANTHER - 4 241 - -
Psa5g4076 248 PANTHER DISEASE RESISTANCE PROTEIN RP 4 241 IPR044974 GO:0006952
Psa5g4076 248 PRINTS Disease resistance protein signature 29 44 - -
Psa5g4076 248 PRINTS Disease resistance protein signature 109 123 - -
Psa5g4076 248 PRINTS Disease resistance protein signature 208 222 - -
Psa5g4076 248 Pfam NB-ARC domain 16 237 IPR002182 GO:0043531
Psa5g4076 248 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 241 IPR027417 -
Psa5g4076 248 Gene3D - 2 164 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4076 Psa-Chr5 323546013 323546759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4076 17 215 WRKY Transcription Factor Family AT5G45050 29.612 2.52e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4076 K13457 - gmx:100819372 288.115