Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4064 ATGCCAATGCTTTCCCTAAAAAACCCCAACAAGCTTCTCTCATCATCTCCCATTCCCACTCCAATTTCTCACACTGCACTCTCTTCTTCACATTCTTCATTCACTCTCAGAAACTCTGTTTCACTGAACCCTAGACTAAGAACCAGTAACACCGAACCCCTGCGACGTCGTTTTAGACCCGTTACATGCTCATTTTCATTAGTTGATAATGCTAAGATTAAGGTTGTCGGTGTTGGTGGCGGTGGCAACAATGCCGTTAACCGCATGATTGGTTGCGGATTACAGGGTGTGGACTTTTATGCTATAAATACTGATGCTCAAGCACTCTTGCATTCTGCTGCTGAAAATCCTATCCAAATTGGAGAACTCTTGACCCGTGGATTAGGTACGGGCGGTAATCCACTTTTGGGGGAAGAAGCTGCTGAGGAGTCAAAAGAAACTATTGCTAATGCTCTTCAAGGTTCAGATTTAGTTTTTGTAACTGCCGGTATGGGTGGTGGTACAGGGTCTGGTGCTGCCCCTGTTGTGGCCCAGATAGCAAAAGAGGCTGGCTACTTAACCGTAGGTGTTGTTACCTATCCATTCAGTTTCGAAGGACGCAAAAGATCCTTGCAGGCACTAGAAGCCATTGAAAAGCTGCAGCAAAATGTGGATACACTTATAGTGATTCCAAACGACCGTCTTCTTGACTTAGCTGATGAGCAGACGCCTCTTCAGGATGCTTTCCAGCTTGCCGATGATGTTCTACGACAGGGAGTACAGGGAATATCAGACATCATAACAATACCCGGTCTTGTAAATGTGGATTTCGCTGATGTAAAAGCTGTGATGAAAGACTCTGGAACTGCAATGCTTGGAGTAGGTGTTTCGTCTGGTAAAAACCGTGCAGAAGAAGCTGCAGAACAGGCTACTTTGGCACCTTTAATTGGATCATCTATTCAATCAGCTACCGGAATAGTGTATAATATTACTGGAGGAAAAGACATAACTCTGCAGGAAGTGAATAGAGTGTCTCAGGTAGTGACAAGTTTAGCTGATCCTTCTGCCAATATTATATTTGGAGCTGTTGTTGACGATCGCTACAATGGCGAGATTCATGTGACTATCATCGCAACCGGCTTCTCACAATCCTTCCAAAAGATACTACTAACAGATCCAAGGGCTGCAAAGCTTCTTGACAGATTACCAGTGGGAAAAGAAAGCAACCAAACGTCCCCTCCCCTCAAAGGCTCAGACTTTTCCTCTACAGTTGCATCTAAAGCATCCCCACGGAAGCTCTTCTTTTAG 1287 0.4476 MPMLSLKNPNKLLSSSPIPTPISHTALSSSHSSFTLRNSVSLNPRLRTSNTEPLRRRFRPVTCSFSLVDNAKIKVVGVGGGGNNAVNRMIGCGLQGVDFYAINTDAQALLHSAAENPIQIGELLTRGLGTGGNPLLGEEAAEESKETIANALQGSDLVFVTAGMGGGTGSGAAPVVAQIAKEAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQQNVDTLIVIPNDRLLDLADEQTPLQDAFQLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSGKNRAEEAAEQATLAPLIGSSIQSATGIVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKILLTDPRAAKLLDRLPVGKESNQTSPPLKGSDFSSTVASKASPRKLFF* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4064 428 SUPERFAMILY Tubulin C-terminal domain-like 266 380 IPR008280 -
Psa5g4064 428 ProSitePatterns FtsZ protein signature 1. 103 137 IPR020805 GO:0005525
Psa5g4064 428 Pfam FtsZ family, C-terminal domain 281 374 IPR024757 -
Psa5g4064 428 SMART Tubulin_C_4 266 383 IPR018316 -
Psa5g4064 428 SUPERFAMILY Tubulin nucleotide-binding domain-like 71 267 IPR036525 -
Psa5g4064 428 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 4 428 - -
Psa5g4064 428 Gene3D - 280 384 IPR037103 -
Psa5g4064 428 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 165 171 IPR017975 GO:0005525|GO:0005874|GO:0007017
Psa5g4064 428 ProSitePatterns FtsZ protein signature 2. 156 177 IPR020805 GO:0005525
Psa5g4064 428 Gene3D Tubulin/FtsZ, GTPase domain 66 279 IPR036525 -
Psa5g4064 428 PRINTS Cell division protein FtsZ signature 157 177 IPR003008 GO:0005525
Psa5g4064 428 PRINTS Cell division protein FtsZ signature 185 206 IPR003008 GO:0005525
Psa5g4064 428 PRINTS Cell division protein FtsZ signature 248 270 IPR003008 GO:0005525
Psa5g4064 428 PRINTS Cell division protein FtsZ signature 271 292 IPR003008 GO:0005525
Psa5g4064 428 Hamap Cell division protein FtsZ [ftsZ]. 68 398 IPR000158 GO:0003924|GO:0005525
Psa5g4064 428 TIGRFAM ftsZ: cell division protein FtsZ 69 379 IPR000158 GO:0003924|GO:0005525
Psa5g4064 428 Pfam Tubulin/FtsZ family, GTPase domain 72 232 IPR003008 GO:0005525
Psa5g4064 428 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 4 428 IPR045061 GO:0003924|GO:0005525
Psa5g4064 428 SMART Tubulin_4 72 264 IPR003008 GO:0005525
Psa5g4064 428 CDD FtsZ_type1 88 373 IPR000158 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4064 Psa-Chr5 321581355 321584448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4064 152 368 PP2C-type Phosphatase Gene Family AT1G75010 22.368 4.04e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4064 K03531 - gmx:100809043 658.292