Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4059 ATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCAATGAAACTTGCCGATGATATCAGTGGCATGATTTCTGAACATAATTCATTTCCTTCATCTGGACCTGAAACACAGCGTCATGCATCTGCTATAAGAAGGAAGATAACAATATTGGGGACCAGACTGGATAGCTTGCAATCCCTTTTGTCAAGGGTCCCTGTAAAGTCCGAGAAGGAGATGAATCGTCGCAAGGACAACCTTGCAAATTTGAGGTCAAAGGTTAACCAAATGGCTTCAACATTGAACATGTCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAATAAAACCAGATGCAATGAGCAGAACCGTTGGCTTGGATAACAATAAACTTGTTGGTCTGCAACGGCAAGTTATGAAAGAGCAAGACGAGGGCCTTGAGAAATTGGAGGAAACCGTATTAAGTACGAAACATATTGCGTTGGCAGTGAATGAAGAGCTGACTCTACACACTAGGCTCATTGATGACTTGGACGAACATGTTGATGTCACAGATTCTCGGCTGAGGAGAGTGCAGAAGAATTTGGCCATTTTAAATAAACGTACAAAGGGTGGTTGCTCATGCTTGTGCATGCTATTATCAGTGATTGGTATAGTGGTCTTGGTTGTTGTCATATGGCTTCTGGTCAAATATTTGTAG 690 0.4174 MASSSDSWMKEYNEAMKLADDISGMISEHNSFPSSGPETQRHASAIRRKITILGTRLDSLQSLLSRVPVKSEKEMNRRKDNLANLRSKVNQMASTLNMSNFANRDSLLGPEIKPDAMSRTVGLDNNKLVGLQRQVMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKNLAILNKRTKGGCSCLCMLLSVIGIVVLVVVIWLLVKYL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4059 229 SUPERFAMILY SNARE fusion complex 125 194 - -
Psa5g4059 229 SMART tSNARE_6 128 195 IPR000727 -
Psa5g4059 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Psa5g4059 229 CDD SNARE_Qc 136 193 - -
Psa5g4059 229 PANTHER SYNTAXIN 1 223 IPR045242 -
Psa5g4059 229 Pfam SNARE domain 170 221 IPR000727 -
Psa5g4059 229 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 223 - -
Psa5g4059 229 Gene3D - 134 197 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4059 1 229 SNARE and Associated Proteins AT1G79590 73.820 1.24e-121 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4059 K08503 - gmx:100794038 373.629