Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4037 ATGAATAAGATTTTCCTTCGGTATCACCGTTTCTTCGTGTTCTTGCTTCTTACAAGGGTTTCTTTAACCGCATCACTCCCACACACTCATAATGGTCATGTAGATTCAGATACTGCAAGAATTCTGAATCAGGAGCATGGTGATGTTCATCGAATACATTGCTCTAGAGAAAGAAGTAGAATAGCTTGGAAGATCATTCAAGAGTATTTGACGCCAGTTGTGGAGAAAGAAAAATATAATATCTCAAGAACGTGCAGGCTTCACCCTGAAAATGATATATACAGAGATCAGGAACATCATAAATCTCATATAGATATATATGAGTGGCAGTGTGGATACTGTAAGAAAACTTTTTACGAAGAGAAACATCTTGATCAGCATTTTGACAACAGACACTCCAATTTACTTAATTTGAATGAAAGCCAGTGCTTAGCAGATGTATGTGGAGCATTGCACTGTGACCATGACATCAATTCCGGGTCAAAAAAATCAAAGTGCAATCCTGCTGCTGCAGCAAGAAATAAACATCTATGTGAGACCTTAGCAGATAGTTGTTTTCCGGTTAACACGGGCCCTGCGGCAAGCCGGCTTCACGAATTCTTCTTGCATCAATTCTGTGATGCACACAGCTGCGCTGGAAGTGGGAAGCCTTTCTCCAGAGGGCGCAGGAAAAAGAAAAACGGGTTCTACATTGCTGCCTCCGTTTTTCTTGTGACGCTGCTGTTATTTTACTATCTATACATTTATTTATATCGGAGAGGATTGAAAAGAGAAACTCAAATGCTGAAACGAATCTCACAAGCTGGACGAAAAAAGAAGCCATCTTAA 828 0.401 MNKIFLRYHRFFVFLLLTRVSLTASLPHTHNGHVDSDTARILNQEHGDVHRIHCSRERSRIAWKIIQEYLTPVVEKEKYNISRTCRLHPENDIYRDQEHHKSHIDIYEWQCGYCKKTFYEEKHLDQHFDNRHSNLLNLNESQCLADVCGALHCDHDINSGSKKSKCNPAAAARNKHLCETLADSCFPVNTGPAASRLHEFFLHQFCDAHSCAGSGKPFSRGRRKKKNGFYIAASVFLVTLLLFYYLYIYLYRRGLKRETQMLKRISQAGRKKKPS* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4037 275 ProSitePatterns Zinc finger C2H2 type domain signature. 111 132 IPR013087 -
Psa5g4037 275 PANTHER ZINC FINGER PROTEIN-RELATED 9 275 - -
Psa5g4037 275 SUPERFAMILY Expressed protein At2g23090/F21P24.15 104 134 - -
Psa5g4037 275 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 134 IPR013087 -
Psa5g4037 275 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4037 Psa-Chr5 319304590 319307897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4037 32 275 C2H2 Transcription Factor Family AT5G63280 57.724 2.51e-106 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa5g4037 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4037 - - lang:109338698 427.172