Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4018 ATGTCAATAATCGGTTGTGTATGCAATTTTGATGTTGAAGGCCTTGATGACAACCATGTTTGGACATTTGAAAGTACATTTGCTAGTAAAAGATACTGCATTGTTGTCATTCCATGTTCACCCAAGTTTCCAAGTTCCGATGATCTAGTTACTAGTTTTGTAGTGGGATATCCAAGCACTGAGAGTCATAGACCGCGAGAGTTTGGCTTTGCAAATGATCATTGTAGTAGCTGTTCTACATATATCTTGGCCACAGGCTGCTCTGATGATAGCTTGAAACTTTGCAAAAGTAACCATGACAATCTGTCGACCCTGAACTTGCCTTGGGAGCTTGTGGGTATGTTTATTGCACATAACAGTCCGGTCAAGGGTATCCGTTTCACTGATTGTGGTCAGAAAGTTGCAACGTTCTGTAGTAGAAATGATTCCAATGCTGTCAATACCATCCATATATGGGATGCTATAAACATGATAATTGCAGGGACTTTTATTTTAGAAGACACACTAACGTTTGAAAGCGATGTTATTACTCTCAAGTGGTCAACTTTAGGGACTGAGTCGAATGCTGCTCATGCTAACCTTATTGCATCTATAATTCTCAAGACCAAAGATTCAGGTTCAACAGACTGTGCTGGCACATTCGGACATCATTCCCGCTCCGAACGCAAGTATTTTATGAAGAATTTGGACAAGACATTTGATTCCAAGGCTTTGTATGACACTTTTTCTACGATTACACATCCTGTTTTTTGCAAAATGGCTACCGTTGGTTCTTGCCATTCTAAAGGTTTTAGCTTTGCCCAATTTGAGAATGTTGAACCTGCAAAGAATACAAATTGA 840 0.3964 MSIIGCVCNFDVEGLDDNHVWTFESTFASKRYCIVVIPCSPKFPSSDDLVTSFVVGYPSTESHRPREFGFANDHCSSCSTYILATGCSDDSLKLCKSNHDNLSTLNLPWELVGMFIAHNSPVKGIRFTDCGQKVATFCSRNDSNAVNTIHIWDAINMIIAGTFILEDTLTFESDVITLKWSTLGTESNAAHANLIASIILKTKDSGSTDCAGTFGHHSRSERKYFMKNLDKTFDSKALYDTFSTITHPVFCKMATVGSCHSKGFSFAQFENVEPAKNTN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4018 279 Gene3D - 219 275 IPR012677 -
Psa5g4018 279 PANTHER RABCONNECTIN-RELATED 6 188 - -
Psa5g4018 279 SUPERFAMILY WD40 repeat-like 78 182 IPR036322 GO:0005515
Psa5g4018 279 SUPERFAMILY RNA-binding domain, RBD 214 276 IPR035979 GO:0003676
Psa5g4018 279 PANTHER RABCONNECTIN-3A 6 188 - -
Psa5g4018 279 Gene3D - 32 218 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4018 Psa-Chr5 317426087 317427667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4018 225 276 Eukaryotic Initiation Factors Gene Family AT4G34110 50.000 4.50e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4018 K24155 - gmx:100795225 234.187