Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4010 TCATCAACTCCATGTTGTCTCTGGTCCCAATTCACCAGCCAATTCAGCATATGGTTGAAGATTTCGGCATATGTCACAGACGGGCTGCCTCTTAGTTTAAACTGTAATCCACTCGAGGAAATATCAGATGATTTTACAGGAGATAGAGTTGCACCAGATAACGGCTCCATCGATGACTGTGTAGGGGAGCCAATAGTAGAAGATGTTGGAGTAGCTTTAACAGGAGATATTGTTGCTCTTGCTGGTTTAAAAGACACTATAACAGGTGAAACGTTGTGTGGCCCTGAGAGTCTGGTCATGCTTGAGCAGATGGACTTCCCTGATCCTGTGATTAAGATTGCTATTGAACCCAAGACTAAAGCTGATATTGGCAAGATGGCAGCTGGTTTAGTCAAGCTTGCACAGGAAGACCCTTTTTTCCACTTTTCCCGTGATGAAGAGATAAATCAGACAGTCATTGAAGGAATGGGAGAATTGCATCTGGAAATCATTGTTGATCGCCTTAAAAGAGAATATAAGGTGGAAGCTAATGTTGGAGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAATCTCACAAGTGAGGTATGTGCATCTAGAAATCACATCATCGCAACAGCATTGTCTTCATTTGCAGGCAGTCCTGAATTCTTTAGTGACTCCAATATTTCACTTTTCTTCAATGTCCTTGACTTGGTTAAACACAAGGAAGTGTATGCACGAAGAATTGTTGGCTCCTTTTGTTCCATGA 753 0.421 SSTPCCLWSQFTSQFSIWLKISAYVTDGLPLSLNCNPLEEISDDFTGDRVAPDNGSIDDCVGEPIVEDVGVALTGDIVALAGLKDTITGETLCGPESLVMLEQMDFPDPVIKIAIEPKTKADIGKMAAGLVKLAQEDPFFHFSRDEEINQTVIEGMGELHLEIIVDRLKREYKVEANVGAPQVNYRESISKISQVRYVHLEITSSQQHCLHLQAVLNSLVTPIFHFSSMSLTWLNTRKCMHEELLAPFVP* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4010 250 Pfam Elongation Factor G, domain III 106 179 IPR041095 -
Psa5g4010 250 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 68 212 - -
Psa5g4010 250 CDD EFG_III 107 182 IPR009022 -
Psa5g4010 250 Gene3D Translation factors 62 109 - -
Psa5g4010 250 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 68 212 - -
Psa5g4010 250 SUPERFAMILY EF-G C-terminal domain-like 106 183 IPR035647 -
Psa5g4010 250 SUPERFAMILY Translation proteins 67 107 IPR009000 -
Psa5g4010 250 Gene3D Elongation Factor G (Translational Gtpase), domain 3 110 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4010 Psa-Chr5 316831124 316832330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4010 74 189 Eukaryotic Initiation Factors Gene Family AT3G22980 35.294 3.27e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4010 K02355 - cpap:110817580 238.424