Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g4003 ATGAGCCATGCTGGTATTACAACAGTTGATGTCCTGACTCCCAAGGTTTTCATCGGTCTGATTGTGGGTGCCATGCTCTCTTACTGGTTTTCTGACCTGACCATGAAGAGTGTTGGAAGCACAACATTGAAGATGGTTGAGAAAGTTTGCAGGCAATTCAACACGATTCCCAGATTGATTGAGGGAACTGCGAAACCTGACTATGCCACATGTGCTACAATCACCACCTCAGATCCAATGCAGACTGGCTCTGCTCAATCTCCAACTAGTTCGGTAGAGAATGAGTATACAACATCTGTTGGAGGAGGAGGTGTCTTTAATTCTTCTCAGAATGCTGTTGATGAGTATGACTTTGGAGACTTCGTTTTTCCTGACAGTGCTATTTCGAGCTTTGGAAAAGCTCCGAACATTCCTGATATCGTAGAGAGTAGCCGCTATGTTGCCTCCTCACCCGCGATCAGAGTTTGTTACCGTAGCAAGTAA 483 0.4534 MSHAGITTVDVLTPKVFIGLIVGAMLSYWFSDLTMKSVGSTTLKMVEKVCRQFNTIPRLIEGTAKPDYATCATITTSDPMQTGSAQSPTSSVENEYTTSVGGGGVFNSSQNAVDEYDFGDFVFPDSAISSFGKAPNIPDIVESSRYVASSPAIRVCYRSK* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g4003 160 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 7 87 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Psa5g4003 160 PANTHER UBIQUITIN CARRIER PROTEIN 7 7 87 - -
Psa5g4003 160 Pfam Inorganic H+ pyrophosphatase 5 80 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g4003 Psa-Chr5 315380605 315381346 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g4003 1 70 Primary Pumps ATPases AT1G15690 80.000 2.20e-31 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g4003 K23025 - pop:18111071 125.946