Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3998 ATGATGCCAAGTTTTATAACAAATTCATCCGACAAAGACTCGGAGCCATTTGTCGAAACTGATCCGACCGGAAGATATGGAAGATACAACGAGCTCCTAGGTTCCGGCGCTGTGAAGAAAGTATACAGAGCATTTGATCAAGAAGAAGGAATAGAAGTAGCTTGGAATCAAGTTAAGCTCAGAAACTTCAGTAAGGACCCTGCAATGGTGGATAGGCTTTACTCTGAAGTGAGATTGCTTAGAAGCATGACAAACAAAAACATCATTGCCCTTTATAGTGTTTGGAGAGATGAAAAACATAACACACTGAATTTCATTACTGAGGTTTGCACAAGTGGGAATTTGAGGGAGTATAGGAAGAAACATAAACATGTTTCTGTTAGGGCTTTGAAGAAGTGGTCTAAGCAGATTCTGGAAGGGTTGAATTATTTGCATGTTCATGATCCTTGTATCATTCATAGAGACCTCAATTGCAGCAATGTTTTCGTCAATGGAAATACTGGCCAGGTGAAGATTGGAGACTTAGGATTGGCAGCAATTGTGGGAAAGACACATTCAGCACATTCAGTTTTGGGGACACCGGAATTTATGGCACCGGAATTATACGAAGAGAGTTACACAGAAATGGTGGACATATACTCATTTGGAATGTTAGTATTAGAGATGGTGACACTAGAGATTCCATATAGTGAATGTGACAGTGTTGCAAAGATATACAAGAAGGTTTCTTCAGGTGTGAGACCACAATCCTTAAACAAGATTAAAGATGAAGAGGTTAAGGCTTTCATTGAAAAGTGTCTTTCTCAACCAAGAGCTAGACCTTCTGCTGAAGAATTGCTCAAGGATCCTTTTTTTGATGTTTTAGATGATGATGAAAATGATGATGAAAACTTGGATATTTTGTGA 906 0.3885 MMPSFITNSSDKDSEPFVETDPTGRYGRYNELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSKDPAMVDRLYSEVRLLRSMTNKNIIALYSVWRDEKHNTLNFITEVCTSGNLREYRKKHKHVSVRALKKWSKQILEGLNYLHVHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKTHSAHSVLGTPEFMAPELYEESYTEMVDIYSFGMLVLEMVTLEIPYSECDSVAKIYKKVSSGVRPQSLNKIKDEEVKAFIEKCLSQPRARPSAEELLKDPFFDVLDDDENDDENLDIL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3998 301 PIRSF TyrPK_CSF1-R 76 295 - -
Psa5g3998 301 PIRSF TyrPK_CSF1-R 28 130 - -
Psa5g3998 301 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 297 - -
Psa5g3998 301 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Psa5g3998 301 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g3998 301 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
Psa5g3998 301 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Psa5g3998 301 CDD STKc_WNK 25 285 - -
Psa5g3998 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 297 - -
Psa5g3998 301 MobiDBLite consensus disorder prediction 1 21 - -
Psa5g3998 301 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3998 Psa-Chr5 314731090 314733007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3998 11 286 MAP Kinase Kinase Kinase AT5G55560 83.333 0.0 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Psa5g3998 Pkinase 8.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3998 K08867 - gmx:100782039 525.783