Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3983 ATGTCACACTACGCATGGCATAATGTGACTGAAATTTCAAGAACCACAACCAGGCATGTGTTTGCAACAATGTCGTTTATTGCGGAAACCTTCATATTTCTTTATGTGGGTATGGATGCCCTTGACATTGAAAAGTGGAGGATGACCCATTTAAGATTTGGAAATTTGTTGGGAATTTACAGTTGCTTAATCTTCTTAATATTGCTGGGGAGGGCTGCATTTATATTCCCCCTCTCCGCACTTGTCAATTATATGAATAGGCGCGTCGAAGAAACACCGGGTATCACATTACAACACCAGATAATCATTTGGTGGGCTGGACTAATGAGGGGAGCAGTCTCCATCGCTTTGGCTTTCAAACAGTTCACCTTCTCTGGGGTTACTTCAGACCCGGTTAAAGCGACAATGATTACCAACACCATTATTGTTGTACTTTTCACTACACTGGTGTTTGGTTGTCTCACAAAACCACTTATTAGATATCTTCTTCCCCACCATGTAAGAAGGATAAACACCAGACATGAAGAATCATCGGAGCCGGGGTCACCAGTTGGGGACTTGAATCTACCTTTGCTATCCTTCCATGAGTCAACAGAAACCAACATTAGCCGCGCAAAGGAAAGCCTATCCATGTTAATAGGAAGTCCTGTGTACACCATACATTACTATTGGAGGAAGTTTGATGATGCGTACATGAGACCTATATTTGGAGGACCTTGCTCTAACCCTGACACTTTAGAGTGCTAG 747 0.427 MSHYAWHNVTEISRTTTRHVFATMSFIAETFIFLYVGMDALDIEKWRMTHLRFGNLLGIYSCLIFLILLGRAAFIFPLSALVNYMNRRVEETPGITLQHQIIIWWAGLMRGAVSIALAFKQFTFSGVTSDPVKATMITNTIIVVLFTTLVFGCLTKPLIRYLLPHHVRRINTRHEESSEPGSPVGDLNLPLLSFHESTETNISRAKESLSMLIGSPVYTIHYYWRKFDDAYMRPIFGGPCSNPDTLEC* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3983 248 Pfam Sodium/hydrogen exchanger family 17 159 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g3983 248 PANTHER SODIUM/HYDROGEN EXCHANGER 1 243 - -
Psa5g3983 248 PANTHER SODIUM/HYDROGEN EXCHANGER 1 243 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3983 Psa-Chr5 313937014 313938506 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3983 1 239 Antiporters AT5G55470 67.364 1.11e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3983 - - gmx:100813332 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3983 5 313937014 313938506 Psa5g3983 5 313937014 313938506 ECH