Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3982 ATGGCCATGATCATGAGCATGATGAGGGTTGCATTTGATATCCCATCTGATATGGAAAAAAATATGGCTCATGATCATGCACAGGTTGTTCCTATAACACTCTTTGTCGCTGTTCTTTGCCTCTGTATCATTGGTCACTTGCTTGAAGAAAGTCGATGGGTTAATGAATCTATTGTTGCCATTTTTGTTGGATGCATTGCTGGAGTGGTTATATTGTTAATAACTCAGGGAAAAAGTTCTCGAATCCTTACATTTAATGAAGAAGTATTCTTCATATATCTCCTTCCTCCTATAATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCACAACTTTTTGACCATCATGCTGTTTGGAGTGGTCGGTGTTTTTATTTCAACATCTATTATTACCGTTGGCAGCTGGTGGCTGTTTCCCAAGTTGGGCTTCCCTTCCCTTACAGCGCTAGATTATCTTGCTTTAGGAGTAATTTTCTCCTCAACCGACACAGTATGTACGCTACAGGTTCTTAATCAAGAAGCTACTCCTTTACTATACAGCTTAGTCTTTGGGGAAGGAGTGGTAAACGATGCAACATCAGTTGTACTCTTCAATGCAGTCCAAAAGCTTGATGTTTCAAGACTTGACGGCAAGGCATTCCGTGTTATTGGTGATTTCTTGTATCTATTCGCAGCAAGCACTGCGCTTGGAGTCATAGCTGGACTTGTCACAGCATATATCTTGAAAGCGTTAACCTTTGGAAAACATTCAAATGTTCGTGAAATTTCAATGATGATGTTAATGGCATATCTATCCTACATGCTGGCAGTGTTGGGAAAGGTAACACAAAAACAAACGCCTAAAACAAGGTCGGCGGATAAATGA 873 0.3998 MAMIMSMMRVAFDIPSDMEKNMAHDHAQVVPITLFVAVLCLCIIGHLLEESRWVNESIVAIFVGCIAGVVILLITQGKSSRILTFNEEVFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVVGVFISTSIITVGSWWLFPKLGFPSLTALDYLALGVIFSSTDTVCTLQVLNQEATPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLDGKAFRVIGDFLYLFAASTALGVIAGLVTAYILKALTFGKHSNVREISMMMLMAYLSYMLAVLGKVTQKQTPKTRSADK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3982 290 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa5g3982 290 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa5g3982 290 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa5g3982 290 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Psa5g3982 290 Gene3D - 150 202 - -
Psa5g3982 290 PANTHER SODIUM/HYDROGEN EXCHANGER 3 15 275 - -
Psa5g3982 290 Pfam Sodium/hydrogen exchanger family 34 277 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Psa5g3982 290 PANTHER SODIUM/HYDROGEN EXCHANGER 15 275 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3982 Psa-Chr5 313929350 313931548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3982 20 274 Antiporters AT5G55470 70.817 3.50e-130 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3982 - - gmx:100813332 410.609