Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3956 ATGAACATGAAGCAAAAGAACAACAACAACAACCCAGATACTGGTTTCTTTGGAAGCATCTCTTCCACTTCCATCAAAAAGCTTCTTCCTCTTTCTTCCTTCCGCAAACCCAATTCTTCAAACGCTAAATCTAATCTTGAAAACGTTCCTCCAATCCACTCAAACATACCCATCACCCATCATCAAACTCAACCAAACCCTAAAACGCAAATTTCTCACAACAACCCACATGTCAAGGTTGTGGTGAGAATTAGACCTGATGTAAAAGAGGGGGATTGTATAGCTAACAAGGTTTCTTCTGATGCTCTGTGTGTTAGGGATAGACAGTTCAAATTTGATGAAGTTTTTGATGCTAAATCCAATCAGGAAGATATTTTTCAGTCGGTGGGTGTTCCTTTGGTTCGAAATGCTTTAGCTGGTTACAACACTTCAGTTCTGTCATATGGCCAGTCTGGAAGCGGAAAGACGTACACAATGTGGGGTGCACTGAGTTCCATGGCTGAGGATCCCTCGTGTCTTAGTCCTCAGGGAATTGTTCCTCGGATCTTCCAAATGTTATTTTCTGAGCTTGAAAGAGAAAGACTTGTGTCTGACCAGAAACAGTTCAGCTATAAATGCCGTTGTTCTTTTCTTGAGATATACGACGATCACATTGGGAACTTACTCAATCCAAACCAGAAGAACCTTGAGATGAAAGATGACCCCAAAAATGGACTACATGTTGAGAATCTGAGTGAGGAATATGTCACATGCTATGATGACGTGGCTCGAATTTTGATCAAGGGCTTGTCAAGCAGAAAAGTCGGAGCAACAAGCTTAAATTCTAATAGCTCGAGATCACATATCATTTTCACTTTTGTAACTGAGTCTTTGTATAAGGGGACCGCAAAGGGTTTCAGTAGTTTAAAAGCTAGCCGAATCAGCCTTATTGATCTTGCCGGACTGGATAGAGATAGAGTTGACAACGGAAGCAGCCAATGTCAACGGGAAAACAGATATGTAGAGAAATCATTATCTCAGCTTGGGCATTTAGTGGATTCTCTTACTGGCAAATCTTGGCCTGGAGAAAATGAAGATATTCCATGCAGTAACTCTTGTTTTACTCGGTTGCTACAAGATTCACTTGGTGAAAATGCCAATCTCTCAGTAATATGTTCAATCTCCCTTGATAGCAAGAGCATTGATGAAACACTCTGCACACTCAGATTTGGGGAGCAAGTAAGATCCATTAGAAACAAGCCAAGTATTAATATAATAAAGGAGTCCGATGATTTGAGTGGTAAAATCCGGCACTTGAAGGATGAACTTATTAGAGCAAAGGACAATAATGTTCATAGCTCAGTCGTGAGTAAAAATAATGGATGCTTCCAAGGACAGAATGCACGAGAAAGCCTTAATCTGTTGAGAGTCAGCTTAAACCGTTCTCTACTCCTATCTAACTTAGATAGTAATACTGATGAAGATGTGAATGTCAATGAGGATGACATAAGGCAATTACACCAGCAAATTGATGAATTAGACAGTTCTTGCGAATGGAATACAAAAGACATATCTGTCGCTGAAGATGGTGTTCAGTTTTATTCTTTTGATGAATATTATGATGCAGACACAATCATAGGTGATGAAAATTCTGTTGGCGATAACATTTCATTTAGCAAATCTTCAATACTTGACGAACCACCACTGTCCGAGTCTCCAAAATTCAGCAATACCAAAAGGAAAAGTGTAGCTATTTCATCGAGTTATCTAGGAAGTAGGAACACTGTTGAAGAGATTTCAGCATCTGGGGATGATGTTTTAAGAAAATCATTGAAACAAGGTGAGCATAAGCGAGGCTCATTGCAGTCGAGCGAAGCTGATTTCTTGGCAGAAAGCCTCCAGAGGGGATTACAGATAATTGACTATCACCAACAGAACTCGACATTGAACAAGTCTTCAAGTTCCTTCTCCTTTGACCGCTTAACTTTGACACCATGTCCAGAGATTGATAAGGTTCAACCTTATGATCAAACAATACAACAGAAAGTTTCCAATGATGAAGTTACTTCCACATTCCTTTGTGCGTCTTGTAGTACAGATTTGACAGCTAAAGTTCCAATTCCAAAAAATTTGGAAAATGTAATGGCAAAAGGCAACATGAGAGAGAAGGAGCTCGAGAATGTTTGTAAGGAGCAAGCAGCTAGAATTGAACAACTAAATCAATTGGTGGATAAGTTGAAAGGAGAGAAAAATCTGAATTCCACTTCTATGCCTGGTCAGTGTGACGAGTATAACTCCATGAAGGATGAAAACAAGCTTCTATGGGGCACTTTCTCAAATGGTCATTCACTGTATAGTATAGAGGAGAAATGCGAAACTAAAGAAGTCCACGAAGAGTTAGCTCAGAGAGACATCTTTTTTGATTCAACTGAGAAGGAATCACTTCTTCAAGAAATTCAGAGTCTAAGAAGAAGGCTGCAATTATGCAACGACGCACCGGTCAAAATGTCTACAGACAAACTTAGATCTTCTTTAATGTCAAGATCCATCCAACTACAAAAAAGTGGCGTATTTTCTCAAGATAATAGGAACGAGGAGCTGGAAAACGAAAGACAGAGATGGACAGAAATGGAAAGTGATTGGATTTGTCTTACCGATGAACTTAGAGCTGACCTTGAGTCGTATCGCCGGCATGCAGAGAAATTGGAAACCGAACTGAATTTGGAGAAGAAAGGAAGGGAAGAGATGGACGATGCACTAAAAAGAGCTGTTAACGGGCATGGTAGAATGGTAGAACACTATACTGATCTACAAGAAAAATATGATGACTTGGCTTCTAAGCATGATGCTATGAAGGAAGGGATATCCGAGGTGAAGAAGGCAGTGGCAAAAGCCTCGAAAAAAGGTCAAGCACGCTTTGCCAAATCTCTTTCTGCCGAGCTTTCTGCATTGAGGATGGAGAGGGAAAGGGAGTCAAAATTATTGAAAAAGGAGAACCAGTGTTTGAAAATTCAACTTCGTGACACTGCTGAAGCTGTTCAGGCTGCTGGGGAACTACTCGTTAGACTAAGAGAAGCTGAACAAGCAGCATATGTTGCCGAGGAAAACTTTGCAAATGTGAGACGAGATAATGAAGAGTTAAAAATGGAAGTGGAGAAGCTGAATAGAAAACACAAGACAGAGATTAATACCATTAAGCAGTATATTACAGAGAGCAAATTGCCAGAGTCTGCATTGAAGCCACTGTATCAAGAGGATTCTGATACAATACACAATAATACAACTTCTTCCTATGCTTACGATGATCAAGCATGGAAATCAGAGTTCGGAGCAATATATCAGGAGCATTACTAA 3333 0.3996 MNMKQKNNNNNPDTGFFGSISSTSIKKLLPLSSFRKPNSSNAKSNLENVPPIHSNIPITHHQTQPNPKTQISHNNPHVKVVVRIRPDVKEGDCIANKVSSDALCVRDRQFKFDEVFDAKSNQEDIFQSVGVPLVRNALAGYNTSVLSYGQSGSGKTYTMWGALSSMAEDPSCLSPQGIVPRIFQMLFSELERERLVSDQKQFSYKCRCSFLEIYDDHIGNLLNPNQKNLEMKDDPKNGLHVENLSEEYVTCYDDVARILIKGLSSRKVGATSLNSNSSRSHIIFTFVTESLYKGTAKGFSSLKASRISLIDLAGLDRDRVDNGSSQCQRENRYVEKSLSQLGHLVDSLTGKSWPGENEDIPCSNSCFTRLLQDSLGENANLSVICSISLDSKSIDETLCTLRFGEQVRSIRNKPSINIIKESDDLSGKIRHLKDELIRAKDNNVHSSVVSKNNGCFQGQNARESLNLLRVSLNRSLLLSNLDSNTDEDVNVNEDDIRQLHQQIDELDSSCEWNTKDISVAEDGVQFYSFDEYYDADTIIGDENSVGDNISFSKSSILDEPPLSESPKFSNTKRKSVAISSSYLGSRNTVEEISASGDDVLRKSLKQGEHKRGSLQSSEADFLAESLQRGLQIIDYHQQNSTLNKSSSSFSFDRLTLTPCPEIDKVQPYDQTIQQKVSNDEVTSTFLCASCSTDLTAKVPIPKNLENVMAKGNMREKELENVCKEQAARIEQLNQLVDKLKGEKNLNSTSMPGQCDEYNSMKDENKLLWGTFSNGHSLYSIEEKCETKEVHEELAQRDIFFDSTEKESLLQEIQSLRRRLQLCNDAPVKMSTDKLRSSLMSRSIQLQKSGVFSQDNRNEELENERQRWTEMESDWICLTDELRADLESYRRHAEKLETELNLEKKGREEMDDALKRAVNGHGRMVEHYTDLQEKYDDLASKHDAMKEGISEVKKAVAKASKKGQARFAKSLSAELSALRMERERESKLLKKENQCLKIQLRDTAEAVQAAGELLVRLREAEQAAYVAEENFANVRRDNEELKMEVEKLNRKHKTEINTIKQYITESKLPESALKPLYQEDSDTIHNNTTSSYAYDDQAWKSEFGAIYQEHY* 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3956 1110 Coils Coil 805 825 - -
Psa5g3956 1110 ProSiteProfiles Kinesin motor domain profile. 77 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 PRINTS Kinesin heavy chain signature 140 161 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 PRINTS Kinesin heavy chain signature 271 288 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 PRINTS Kinesin heavy chain signature 306 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 PRINTS Kinesin heavy chain signature 360 381 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 Coils Coil 422 442 - -
Psa5g3956 1110 Coils Coil 715 742 - -
Psa5g3956 1110 Coils Coil 967 987 - -
Psa5g3956 1110 Gene3D Kinesin motor domain 68 441 IPR036961 -
Psa5g3956 1110 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 442 IPR027417 -
Psa5g3956 1110 Coils Coil 1016 1057 - -
Psa5g3956 1110 SMART kinesin_4 75 418 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 Coils Coil 878 912 - -
Psa5g3956 1110 Pfam Kinesin motor domain 100 410 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa5g3956 1110 PANTHER KINESIN-RELATED 56 1091 IPR027640 GO:0003777|GO:0007018
Psa5g3956 1110 PANTHER KINESIN MOTOR DOMAIN PROTEIN 56 1091 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3956 Psa-Chr5 311241627 311248130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3956 108 418 Calmodulin-binding Proteins AT5G65930 35.238 3.75e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3956 K10400 - gmx:100784708 1405.96