Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3944 ATGTGTATTTTACTACACAACGTGATTATGGATTTGAACACCACCTTTCAATGCTGCACAATATTACAAGTTATATATAGTGTACCATATTCCAGTGATAGTCAAATCTCATACTACCTTTTCATCTCCATGGCTCTTCAAATTCTCAACTTCTTCATCCTTTTTGCTATTTTTCTGTTCATGATCATTGCATTAAAAATTAAGAAACATTACAAAATATATGATTCAAGTACTAAAAAAATACCCCCAGGGCCATGGAAGCTACCAATTATAGGCAATATTCTCAATCTTGTTACGACAAACCCACCTAGAAAATTAAGAGACTTAGCCAAAATATATGGACCCTTGATGCGTCTCCAACTTGGCGAGATCTTCTTCGTTGTTGTTTCGTCACCCGAAGTTGCTAGGGAGGTCCTGAAAACGCATGATATTACTTTTGCATCAAGGCCTCATCTTCTAGCCACAGAAATAGCAGCTTATAATTCAACCGATATAGCTTTTTCACCTTACGGTGATTACTGGAGACAACTCAGAAAGATTTGTGCTATTGAGATTTTGAGCACAAGAAGGGTCAAAACTCTTTGGCCAGTAAGAGAGAAAGAGATTAACTCTCTCCTAAAAAATATTTCTTCAAATGAAGGATCAGAATTCAATCTTACTCAAGCAATTATTTCAATGATGTATACTTTCACTTCAATGGCTGCGTTTGGTAAGAAGTATTCAGAACAACAAGAGTTCATATCAGTTGTAAAACAACTGATAAAACTTGCTGGAGGGTTCTATATCGGTGACTTGTTTCCATCAGCCAAGTGGATTCAAAATCTCTCTGGAATGAGACCTAAGCTTGAGAAGTTAAGCCAACAAGTAGACAGGATATTAGAATGTATCATCGATGACCATAAAGAAACAAGATCAAGAAGAGATAAACAAGGTTTGGCTGAAGCAGATGAAGATCTGATCGATAGTCTTTTGAAATTTCACGACAATGACAGTGATACGGATTTTCATTTAACTTCTGATAATGTCAAGGCCATAATTTTGGATATGTTTACTGGTGGAAGTGACACAGCAGCAACTCTCATTAACTGGACAATGGCTGAGATGTTAAAGGATACTAGAGTTTTGAAGAAAGCACAAGCTGAAGTGAGAGAAGGGATTAACAGGAGAGGAAAGATCGAAGAAGCTACGTTCGAAGAATTCAGCTATTTAAAAGCAGTAATCAAAGAGTCACTAAGATTACACCCTTCTGTTCCTCTTCTTCTTCCAAGGGAGAATAGAGAAGCTGTTGTGATTAATGGTTATGAAATACCTGTAAAAAGTAGGGTCATAGTTAATGCTTGGGCCATTGGAAAGGATCCAAAATATTGGACTGAGCCAGATAAGTTTTATCCTGAAAGGTTTATGGATAGTTTGCTTGATTACAAAGGAAGTAATTTTGAGTACATTCCATTTGGTGCTGGAAAGAGAATTTGTCCAGGTATGAACTATGGTTTGGCTAATACTGAGCAGGTTCTTGCACTTTTATTGTATCATTTTGATTGGAAGCTGCCTAATGGTATGAAAAATGAGGAATTAGAGATGACAGAAGAGTTTGGAATTACTATGTCAAGAAAAGGGGACCTTCACTTGATTCCCATCACTTCTCATCAGTTGGTTGTAATATAA 1665 0.3664 MCILLHNVIMDLNTTFQCCTILQVIYSVPYSSDSQISYYLFISMALQILNFFILFAIFLFMIIALKIKKHYKIYDSSTKKIPPGPWKLPIIGNILNLVTTNPPRKLRDLAKIYGPLMRLQLGEIFFVVVSSPEVAREVLKTHDITFASRPHLLATEIAAYNSTDIAFSPYGDYWRQLRKICAIEILSTRRVKTLWPVREKEINSLLKNISSNEGSEFNLTQAIISMMYTFTSMAAFGKKYSEQQEFISVVKQLIKLAGGFYIGDLFPSAKWIQNLSGMRPKLEKLSQQVDRILECIIDDHKETRSRRDKQGLAEADEDLIDSLLKFHDNDSDTDFHLTSDNVKAIILDMFTGGSDTAATLINWTMAEMLKDTRVLKKAQAEVREGINRRGKIEEATFEEFSYLKAVIKESLRLHPSVPLLLPRENREAVVINGYEIPVKSRVIVNAWAIGKDPKYWTEPDKFYPERFMDSLLDYKGSNFEYIPFGAGKRICPGMNYGLANTEQVLALLLYHFDWKLPNGMKNEELEMTEEFGITMSRKGDLHLIPITSHQLVVI* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3944 554 Gene3D Cytochrome P450 74 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 52 548 - -
Psa5g3944 554 SUPERFAMILY Cytochrome P450 82 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS P450 superfamily signature 352 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS P450 superfamily signature 482 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 134 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 341 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 361 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 404 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 481 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 PRINTS E-class P450 group I signature 491 514 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 Pfam Cytochrome P450 82 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3944 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 484 493 IPR017972 GO:0005506|GO:0016705
Psa5g3944 554 PANTHER CYTOCHROME P450 71B11-RELATED 52 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3944 Psa-Chr5 310381022 310383030 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3944 50 545 Cytochrome P450 AT3G26310 38.690 1.15e-123 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3944 - - mtr:MTR_3g058060 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3944 5 310381022 310383030 Psa5g3944 5 310381022 310383030 ECH
Psa2g0211 2 7932232 7933859 Psa5g3944 5 310381022 310383030 PCT