Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3942 ATGGCTCTGTTAATCCTCTACTTTGCATGTCTTTTCTCCTTTGTCCTCTTAACCCTTATGGTTCAAAAGATAATGAAGAAGAAAAGTTATCCAACTTATAACATACCACCAGGACCTAGAGAGCTACCTATTATAGGAAATATACATAATCTGTTAAGCTCTCAACCCCATCGGAAATTAAGAGACTTGGCAAAAAAATATGGATCCGTAATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCGCCGGAGTATGCCAAAGAGCTACGAAAAATCTGCACATTGGAGCTTTTAAGCCTAAAAAGGGTCAACTCATTCCAACCAATTCGAGAAGTTGTGCTTTCCGATCTTGTCAAATGGATTTCCTCACAGAATGGATCACCAATCAACCTCAGTGAAGCTTTAATTTCTTCAATATACACTATTGTTTCGAGGTCCGCCTTCGGTGATAAATGCAAAGACCAAGAAGAATTTATATCAGTGATAAAAGAATCAATAAAGGTTGCAGCAGGTTTTGACTTGGGAGAATTGTTTCCTTCTGCTAAATGGCTACAGCATGTTACTGGGTTGAGGCCTAAGCTTGAGAGGTTTCATCGCCAAACTGATCAGATATTAGAAAATATCATCAATGAACATAAAGAGGCAAAGTACACGAAAGACAAAGATGATCAAGGTGAAGTAGAAGAAGATCTGGTAGACGTTCTCTTAAAATATGAAGATGGTAGCAACAAGGATTTTTCCTTAACAAGAAACAATGTCAAGGCCATAATCCAGGATATGTTTGGTGCTGGAGGTGACACATCATCAAGCACCATAGATTGGGCCATGGCAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTAAGAGAGGTTTTCAAAACGAAAGGAAGGGTTGATGAAAATTGCATGAATGAACTAAATTATTTGAAATCAGTTGTTAAAGAAACACTGAGATTACACCCTCCAGTACCACTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATAAATGGCTATCATATACCGATTAAGAGTAAGGTGATAGTCAATGCTTGGGCAATTGCAAGAGACCCGAACTACTGGACTGAGCCAGAGAGGTTTTATCCGGAGAGATTCATTGGCAGCACTATTGACTATAAAGGGAGTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGAGAAATATTGACCTTACCCTTGCAATGTTGTTGTATCATTTTGACTGGAAGCTACCAATTGAAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGA 1362 0.3891 MALLILYFACLFSFVLLTLMVQKIMKKKSYPTYNIPPGPRELPIIGNIHNLLSSQPHRKLRDLAKKYGSVMHLQLGEVSTIVISSPEYAKELRKICTLELLSLKRVNSFQPIREVVLSDLVKWISSQNGSPINLSEALISSIYTIVSRSAFGDKCKDQEEFISVIKESIKVAAGFDLGELFPSAKWLQHVTGLRPKLERFHRQTDQILENIINEHKEAKYTKDKDDQGEVEEDLVDVLLKYEDGSNKDFSLTRNNVKAIIQDMFGAGGDTSSSTIDWAMAEMIRDPRIMKKAQAEVREVFKTKGRVDENCMNELNYLKSVVKETLRLHPPVPLLLPRECGQACEINGYHIPIKSKVIVNAWAIARDPNYWTEPERFYPERFIGSTIDYKGSNFEYIPFGAGRRICPGSTFGLRNIDLTLAMLLYHFDWKLPIEILSTFLLVLEEEYAQGAHLV* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3942 453 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 87 439 - -
Psa5g3942 453 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 91 - -
Psa5g3942 453 PRINTS E-class P450 group I signature 26 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 141 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 318 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 359 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 395 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS E-class P450 group I signature 405 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 Gene3D Cytochrome P450 26 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PANTHER CYTOCHROME P450 71B11-RELATED 8 91 - -
Psa5g3942 453 PANTHER CYTOCHROME P450 71B11-RELATED 87 439 - -
Psa5g3942 453 Pfam Cytochrome P450 90 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 Pfam Cytochrome P450 36 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 SUPERFAMILY Cytochrome P450 36 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 398 407 IPR017972 GO:0005506|GO:0016705
Psa5g3942 453 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS P450 superfamily signature 319 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3942 453 PRINTS P450 superfamily signature 396 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3942 Psa-Chr5 310355665 310357293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3942 11 431 Cytochrome P450 AT3G26310 38.559 2.04e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3942 - - gmx:100778572 642.884