Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3939 ATGGCTCTATTATTCCTCTACTCTGCATATCTTTTCTCCTTTGTCCTCTTAACCTTTATGGTTCAAAAGATGAGAAACAAGAAAGGTTATTCAATTTATAACATACCACCAGGACCTAGAAAGCTACCTGTTATAGGAAATATATATAATCTGTTAAGCTCTCAACCCCATCGGAAATTAAGAGATTTGGCCAAAATATATGGACCTGTGATGCATCTTCAACTTGGAGAGGTTTCGACTATTGTGATTTCATCGCCCGTATGTGCCAAAGAGGTAATGAAAACCCATGATATTAACTTTGCGTCAAGGCCTTGTCTCCTAGCTTCAGAAATAATGTCTTACAATTCCACAAATATAGCTTTTGCTCCGTATGGTAGTTATTGGAGAGAATTACGAAAAATATGCACATTGGAACTTTTAAGCCTAAAAAGAGTAAATTCGTACCAATCAATTAGAGAAGATGTGCTTTCCAACCTTGTCAAATGGATTGCTTCGCAGGATGGTTCGCCAATCAATTTAACTGAAGCTGTAATTTCTTCAATATACACTATTGTTTCGAGGGCCGCCTTTGGCAATAAATGCAAAGACCAAGAAGAATTTATATCAGTGGTAAAAGAATTGATAAAGGTTGCAGCAGGTTTTGACCTGGGAGATTTGTTTCCTTCTGCTAAATGGCTTCAACATGTTACTGGGTTGAGGCCTAAGCTTGAGAGGTATCATCGACAAACTGATCAGATATTTGAAAACATTATCAATGAGCATAAAGGAGAAAAGTACACAAAAGCCAAAGATGAACAAGGTGAAGTAGAAGAAGATCTGGTAGACGTTCTCTTAAAATATGAGGATTATAGCAACAAGGATTTTTCCTTAACAAAAAACAACATCAAGGCTATAATCCTTGACGTTTTCGGTGCTGGAGGCGAGACATCTGCAAGCACCATAGATTGGGCAATGGCAGAAATGATAAGGGATCCAAGAATAATGAAGAAAGCACAAGATGAGGTGAGAGAGGTCTTCAAAATGAAAGGTAGGGTTGATGAAAATTGCCTCAATGAACTAAATTATTTGAAATCAGTAGTCAAGGAAACATTAAGGCTACACCCTCCAGCACCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATAAACGGCTTTCACATACCGATAAAGAGTAAGGTTATTATCAATGCTTGGACAATTGCAAGAGATCCAAACTACTGGACTGAGCCAGAGAGGTTTTATCCAGAGAGATTCATTGACAGAACTATTGACTATAAAGGTAGTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGAGAAATATTGACCTTACCCTTGCAATGTTGTTGTATCATTTTGACTGGAAGCTACCAATTGAAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGGAGCACATTTGGTTTGA 1479 0.38 MALLFLYSAYLFSFVLLTFMVQKMRNKKGYSIYNIPPGPRKLPVIGNIYNLLSSQPHRKLRDLAKIYGPVMHLQLGEVSTIVISSPVCAKEVMKTHDINFASRPCLLASEIMSYNSTNIAFAPYGSYWRELRKICTLELLSLKRVNSYQSIREDVLSNLVKWIASQDGSPINLTEAVISSIYTIVSRAAFGNKCKDQEEFISVVKELIKVAAGFDLGDLFPSAKWLQHVTGLRPKLERYHRQTDQIFENIINEHKGEKYTKAKDEQGEVEEDLVDVLLKYEDYSNKDFSLTKNNIKAIILDVFGAGGETSASTIDWAMAEMIRDPRIMKKAQDEVREVFKMKGRVDENCLNELNYLKSVVKETLRLHPPAPLLLPRECGQACEINGFHIPIKSKVIINAWTIARDPNYWTEPERFYPERFIDRTIDYKGSNFEYIPFGAGRRICPGSTFGLRNIDLTLAMLLYHFDWKLPIEILSTFLLVLEEEYAQGAHLV* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3939 492 Gene3D Cytochrome P450 31 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 478 - -
Psa5g3939 492 SUPERFAMILY Cytochrome P450 36 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Psa5g3939 492 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 Pfam Cytochrome P450 36 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3939 492 PANTHER CYTOCHROME P450 71B11-RELATED 8 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3939 Psa-Chr5 310271116 310272731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3939 1 471 Cytochrome P450 AT1G13110 40.956 5.79e-130 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3939 - - gmx:100778572 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3939 5 310271116 310272731 Psa5g3939 5 310271116 310272731 ECH