Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3938 ATGGCTCTACTAGTCCTCTACTCTGCATATCTTTTCTCCTTTATTCTCTTAGTCCTTATAGCGCAAAAGATAAGAAAGAAGAAAAACTACTCAACTTATAAGTTACCACGAGGACCTAGAAAGCTCCCGATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATCGGAAATTAAGAGACTTGGCCGACAAGTATGGACCTGTGATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCGCCCGAATGTGCCAAAGAGGTGATGAAAACCCATGATCTTAACTTTGCGTCAAGGCCTCATCTCCTAGCTTCAGAAATAATGTCTTACAATTCCACAAATATAGCTTTTGCTCCTTATGGTAGTTATTGGAGACAGTTACGAAAAATATGCACGTCAGAGCTTTTAAGCCCGAAACAGGTAAACTCGTTGCAACCGATTAGAGAAGAGGTGCTTTCCGATCTTGTCAAATGGATTGCTTCACAGAATGGATCGCCAATCAACCTCACCGAAGCTGTGATTTCTTCAATATACAGTCTTGTTTCGAAGTCTGCGTTTGGAAATAAATGCAAAGACCAAGAAAAATTTATATCAGTGGTGAAAGAATCTATAAAGGTTTCGGCGGGTTTTGATCTGGGAGATTTGTTTCCTTCTGCTAAATGGATACAACGTGTTACTGGTTTGAGGCCTAAGCTTGAGAGCTATCAGCGGCAAACCGATCAGATATTTGAAAACATTATCAATGAGCATAAAGGGGAAACTTACTCAAAAGCCAGAGATGATCAAGGTGATCCGGAAGAAGAAGATCTCGTAGACGTTCTCTTAAAATATGAGGATGGTAGCAACAAGGATTTCTCCTTAACAAAAGACAATATCAAAGCAATAATCATGGACGTTTTTGGGGCTGGAAGTGAGACATCAACAACCACCATAGATTGGGCCATGATAGAATTAGTAAGGGATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTGAGAGAGGTTTTCAAAACGAAAGGAAGGGTTGACGAAAATTACATCAACGAACTCGATTATTTGAAATCAATTGTCAAAGAAACATTAAGGCTACATCCTCCAGCACCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATAAACGGCTTTCACATACCGATCAAGACTAAGGTGATAATCAATGCTTGGGCTATTGCGAGAGATCCAAACTACTGGACTGAACCAGAGAGGTTTTATCCGGAGAGATTCATTGACAGTACTATTGACCATAAAGGGAGTAATTTTGAGTACATTCCTTTTGGTTCTGGAAGAAGAATATGCCCAGGGATCACATTTGGTTTGAGAAATATTGAACTAGCCCTTGCAATGTTGTTGTATCATTTTGACTGGAAGCTTCCCAGTGGAACCAAAAGTGAAGAACTGGACATGACTGAGCAATTTGGAGTCACTGTGAGAAGAAAAGATGATCTTTTATTGTTGCCTTTTGTTTATCATCCTTTGAATGTCACATGA 1527 0.3969 MALLVLYSAYLFSFILLVLIAQKIRKKKNYSTYKLPRGPRKLPIIGNIHNLLSSQPHRKLRDLADKYGPVMHLQLGEVSTIVISSPECAKEVMKTHDLNFASRPHLLASEIMSYNSTNIAFAPYGSYWRQLRKICTSELLSPKQVNSLQPIREEVLSDLVKWIASQNGSPINLTEAVISSIYSLVSKSAFGNKCKDQEKFISVVKESIKVSAGFDLGDLFPSAKWIQRVTGLRPKLESYQRQTDQIFENIINEHKGETYSKARDDQGDPEEEDLVDVLLKYEDGSNKDFSLTKDNIKAIIMDVFGAGSETSTTTIDWAMIELVRDPRIMKKAQAEVREVFKTKGRVDENYINELDYLKSIVKETLRLHPPAPLLLPRECGQACEINGFHIPIKTKVIINAWAIARDPNYWTEPERFYPERFIDSTIDHKGSNFEYIPFGSGRRICPGITFGLRNIELALAMLLYHFDWKLPSGTKSEELDMTEQFGVTVRRKDDLLLLPFVYHPLNVT* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3938 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 505 - -
Psa5g3938 508 SUPERFAMILY Cytochrome P450 36 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PANTHER CYTOCHROME P450 71B11-RELATED 8 505 - -
Psa5g3938 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3938 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Psa5g3938 508 Gene3D Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3938 Psa-Chr5 310261761 310264838 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3938 6 499 Cytochrome P450 AT3G26300 42.209 1.35e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3938 - - gmx:100778040 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3938 5 310261761 310264838 Psa5g3938 5 310261761 310264838 ECH