Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3918 ATGAAGCTTCAGAACTCACTCATGGAGCTTCAGCCCAAAATAATTTCATCTCCCATCTTCTTATTCTTCATCTTCTTATTCATAATATTTATCTTAATTTTGAGTTCAACAAACTCCAAATTACCACCAGGACCACCAAAACTACCTCTTATAGGAAACATACACCAACTTGGTTCAATGCCTCATCATAGCCTAAAAAAATTATCACAAAAATATGGACCATTAATGCATATAAAACTAGGTCAAATTCCAATCATTGTTGTGTCTTCACCAGAAATGGCCAAACAAATCATGAAAACACATGACACCAAATTCTCAAACAGGCCACATCTTCTAGCTGCTGATATTATAACCTATGGTTCAAAAGGCATAACATTTTCACCATATGGTAGCTATTGGAGACAAATGAGAAAAATTTGCACCTTTGAATTATTAACACCGAAGCGCGTTGAATCGTTTCGATCGATTCGGGAACACGAGGTGTCAAATATTGTGAAAGAGATAAGGTTGAGTGAAGGGTCATCTATTAATCTTTCTAAGATGATTGCTTTGTTTTCTTATGGCTTAACATCAAGGATTGCATTAGGAGGAAAATCTGAAGATCAAGAAGCGTTTATGGTTGCTATGAAGGATGTTACGAAACTAATTGGTGGTTTTTCTCTAGCTGATTTGTTTCCTTCCTTTAAACTGCTTCATGTTTTGTCAGGTGTAAGGTCAAAATCTGAGAAGGTGCATGCAGAATTAGATAGGATTCTTGACAAAATTCTTAGATATCATAAACCGGATACAAATTTAGAAACAAAGATAATCGACGAAAAAGATGGTGAAGATTTAGTTGATGTGTTGCTAAAGCTTCAGAAAGAGAACAACCTTGAGCATCCTCTATCTGATAGTGTTATCAAAGCAAACATGTTGGATATATTTAGTGCTGGAAGTGGCACATCATTCAAAACTTCAGAATGGGCAATGTCAGAGCTTATCAGAAACCCAAAAGTGATGAAAAAAGCACAAACTGAGGTAAGAAGAGTGTTTGATGCAAAAGGGTATGTAGCTGAAGCAAATATTCATGAGCTAAAGTACTTAAAGTTAGTTATCAAAGAAACCTTGCGTCTACATGGTCCTGTTCCATTGTTACTACCAAGGGAATGTAGTGAAAGATGTGAAATAAATGGATATGTGATACCAGCTAAGACTAAGGTCATAGTTAATGCTTATGCAATAGGAATGGATCCAAACTATTGGGATGAACCTATGAAGTTTTGTCCAGAAAGGTTCATTGATAGTGAAGTTGATTACAAAGGTGTGGATTTTGAGTTTATTCCATTTGGTGCTGGAAGAAGGATGTGTCCTGGTATAACATTTGGTGTTGTTAATGTTGAAATATTACTAGCAAATTTGCTTTTTCATTTTGATTGGAAAATGGTTGGGGGAAATAAGGGTGAAGAACTTGACATGAGTGAATCATTTGGTTTGTCTGTAAAAAGGAAACATGATTTGTACTTGATTCCTATTGTGTATCATTCATCTTCAAAATCCTAA 1539 0.3528 MKLQNSLMELQPKIISSPIFLFFIFLFIIFILILSSTNSKLPPGPPKLPLIGNIHQLGSMPHHSLKKLSQKYGPLMHIKLGQIPIIVVSSPEMAKQIMKTHDTKFSNRPHLLAADIITYGSKGITFSPYGSYWRQMRKICTFELLTPKRVESFRSIREHEVSNIVKEIRLSEGSSINLSKMIALFSYGLTSRIALGGKSEDQEAFMVAMKDVTKLIGGFSLADLFPSFKLLHVLSGVRSKSEKVHAELDRILDKILRYHKPDTNLETKIIDEKDGEDLVDVLLKLQKENNLEHPLSDSVIKANMLDIFSAGSGTSFKTSEWAMSELIRNPKVMKKAQTEVRRVFDAKGYVAEANIHELKYLKLVIKETLRLHGPVPLLLPRECSERCEINGYVIPAKTKVIVNAYAIGMDPNYWDEPMKFCPERFIDSEVDYKGVDFEFIPFGAGRRMCPGITFGVVNVEILLANLLFHFDWKMVGGNKGEELDMSESFGLSVKRKHDLYLIPIVYHSSSKS* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3918 512 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PANTHER CYTOCHROME P450 71B11-RELATED 20 507 - -
Psa5g3918 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Psa5g3918 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 SUPERFAMILY Cytochrome P450 42 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 Gene3D Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g3918 512 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 20 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3918 Psa-Chr5 309240395 309242103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3918 23 505 Cytochrome P450 AT5G25180 42.159 1.44e-137 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3918 - - gmx:100818000 722.235