Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3872 ATGGTAAGAAACAACCCCAACGTTGTAGTTGTAACCATTCTATTTCTATTATTATCATTACCATTAGTCTCGTGTGAAGAATGTTCATCGAAATATGAAGGTGGTTGTCACGATAAAAATGAAGCACTAAAGTTAAAGGTAATTGCAATATTTTGCATATTATTGTCAAGCATGATTGGTGTTTGCATTCCGATTTTCACAACTTCGGTTCCGGCTTTAAAACCCGACGGAGACTTGTTCGTCGTTATAAAAGCTTTTGCATGCGGTGTTATACTTGCTACCGGTTATATGCACGTGATGCCAGATTCATTTGCGGATTTAACTTCTCCTTGTTTGCCTCAACACCCTTGGCATAAATTCCCATTCACCACTTTCATTGCTATGATCTCCGCCATTTTTACTCTCATGGTTGATTCATTTTCTTTAAGTTATTTTAAAAAGAAACTTCCTATGTCTTCTTCTGTGAATAATTTGGAAACGACAAAGGAATTGGAACTTGGTCATGTTCATGGTCATGGTCTTGCGATTGCAAATGGACATGAGAAGAATGTGAATGCCGAACAATTGCTTCGATACCGTGTTGTGGCTCAGGTTTTGGAGTTAGGAATTGTGGTGCACTCAGTAGTGATTGGTTTGTCAATGGGTGCTTCGGAGAATCCTTGCACAATAAAGCCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGTTTGGGTGGTTGCATATTACAGGTATTATTATTATTATTATTATTATTATCACTATTACTATTATTATACGACTCTAATGTGTTATGTATATTTTTTACAGGCTGA 825 0.3721 MVRNNPNVVVVTILFLLLSLPLVSCEECSSKYEGGCHDKNEALKLKVIAIFCILLSSMIGVCIPIFTTSVPALKPDGDLFVVIKAFACGVILATGYMHVMPDSFADLTSPCLPQHPWHKFPFTTFIAMISAIFTLMVDSFSLSYFKKKLPMSSSVNNLETTKELELGHVHGHGLAIANGHEKNVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASENPCTIKPLIAALCFHQLFEGMGLGGCILQVLLLLLLLLSLLLLLYDSNVLCIFFTG* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3872 274 Pfam ZIP Zinc transporter 44 247 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Psa5g3872 274 TIGRFAM zip: ZIP zinc/iron transport family 28 248 IPR004698 GO:0005385|GO:0016021|GO:0071577
Psa5g3872 274 PANTHER ZINC/IRON TRANSPORTER 25 247 - -
Psa5g3872 274 PANTHER ZINC TRANSPORTER 7 25 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3872 Psa-Chr5 306367682 306369667 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3872 14 248 Inorganic Solute Cotransporters AT1G31260 53.175 2.91e-87 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3872 K14709 - gmx:100784872 300.827