Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3870 ATGGTAAGAAACAACCCCAACGTTGTAGTTGTAACCATTCTATTTCTATTATTATCATTACCATTAGTCTCGTGTGAAGAATGTTCATCGAAATATGAAGGTGGTTGTCACGATAAAAATGAAGCACTAAAGTTAAAGGTAATTGCAATATTTTGCATATTATTGTCAAGCATGATTGGTGTTTGCATTCCGATTTTCACAACTTCGGTTCCGGCTTTAAAACCCGACGGAGACTTGTTCGTCGTTATAAAAGCTTTTGCATGCGGTGTTATACTTGCTACCGGTTATATGCACGTGATGCCAGATTCATTTGCGGATTTAACTTCTCCTTGTTTGCCTCAACACCCTTGGCATAAATTCCCATTCACCACTTTCATTGCTATGATCTCCGCCATTTTTACTCTCATGGTTGATTCATTTTCTTTAAGTTATTTTAAAAAGAAACTTCCTATGTCTTCTTCTGTGAATAATTTGGAAACGACAAAGGAATTGGAACTTGGTCATGTTCATGGTCATGGTCTTGCGATTGCAAATGGACATGAGAAGAATGTGAATGCCGAACAATTGCTTCGATACCGTGTTGTGGCTCAGGTTTTGGAGTTAGGAATTGTGGTGCACTCAGTAGTGATTGGTTTGTCAATGGGTGCTTCGGAGAATCCTTGCACAATAAAGCCTCTCATTGCTGCACTTTGCTTCCATCAACTCTTTGAGGGAATGGGTTTGGGTGGTTGCATATTACAGGCTGATTATGGAGTGAAGATGAAAGTGATAATGGTATTTTTTTTCTCAGTGACGACGCCATTTGGGATAGCATTAGGGATTGGATTATCGGAAGTGTATAGTGACACTAGTCCAACTGCACTAATTGTAGAAGGGGTTCTAAATGCTATTTCTGCAGGGCTTCTCAATTACATGGCACTTGTTGATTTATTGGCTAATGAATTTATGGGTACAAAGTTGCAAAGTAGAATCAAGCTTCAATTATTGTGTTATATAGCTGTTTTTCTAGGTGCAGGAGGCATGTCGGTTATGGCAATTTGGGCTTAA 1047 0.3897 MVRNNPNVVVVTILFLLLSLPLVSCEECSSKYEGGCHDKNEALKLKVIAIFCILLSSMIGVCIPIFTTSVPALKPDGDLFVVIKAFACGVILATGYMHVMPDSFADLTSPCLPQHPWHKFPFTTFIAMISAIFTLMVDSFSLSYFKKKLPMSSSVNNLETTKELELGHVHGHGLAIANGHEKNVNAEQLLRYRVVAQVLELGIVVHSVVIGLSMGASENPCTIKPLIAALCFHQLFEGMGLGGCILQADYGVKMKVIMVFFFSVTTPFGIALGIGLSEVYSDTSPTALIVEGVLNAISAGLLNYMALVDLLANEFMGTKLQSRIKLQLLCYIAVFLGAGGMSVMAIWA* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3870 348 Pfam ZIP Zinc transporter 44 345 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Psa5g3870 348 PANTHER ZINC TRANSPORTER 7 25 348 - -
Psa5g3870 348 TIGRFAM zip: ZIP zinc/iron transport family 28 348 IPR004698 GO:0005385|GO:0016021|GO:0071577
Psa5g3870 348 PANTHER ZINC/IRON TRANSPORTER 25 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3870 Psa-Chr5 306355052 306356276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3870 14 348 Inorganic Solute Cotransporters AT1G31260 56.818 2.51e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3870 K14709 - gmx:100784872 468.003