Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3859 ATGTCGGCAATTATGTTTGCTGCTGATCCATGTAAGGAACAACTCTTTAGCAGCCAAAGCTTGGTTGGAAGCCAAGGACATCACTTGATGAACTGGTGGATTCTACCATTCAATATCAACATCAGACATATTCTCATGCTATCAAGAAAGAACAACTCCAAAACTGGTGATTGCATAAGCAGCTTGGTTGGAAGCCAAGGACATCACTTGATGAACTGGTGGATTCTACCATTCAATATCAACATCAGACATATTCTCATGCTATCAAGAAAGAACAACTCCAAAACTGGTGATTGCACCATCAAGAAAGAGGGTGCTGCTGTTACAGCTCTTCCAGTAGATGAGCCGATCGAGAGGGATGATGGATTTGCTGGGGTATTTCCTGGGCACAAGTACGAGATTGTGAAATGCTTGCAGGCTAGGAAACATATTTGCGGAATGACCGGTGGTGGAGTGAATGATAAACCTGCTCTTAGGAAGGCTGACCTTGCTTTTGTAACCCCAGAGTCTCCTAGTTTTTCAGACAAAGATATTTCAGCTGTAAGAGAGCTTGGTTCACCATTGCTTGGAGTAGCCATATTCATCTTATCAGGCTAA 597 0.4305 MSAIMFAADPCKEQLFSSQSLVGSQGHHLMNWWILPFNINIRHILMLSRKNNSKTGDCISSLVGSQGHHLMNWWILPFNINIRHILMLSRKNNSKTGDCTIKKEGAAVTALPVDEPIERDDGFAGVFPGHKYEIVKCLQARKHICGMTGGGVNDKPALRKADLAFVTPESPSFSDKDISAVRELGSPLLGVAIFILSG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3859 198 PRINTS H+-transporting ATPase (proton pump) signature 120 136 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g3859 198 PRINTS H+-transporting ATPase (proton pump) signature 148 164 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g3859 198 PANTHER CALCIUM-TRANSPORTING ATPASE 106 170 - -
Psa5g3859 198 PANTHER PLASMA MEMBRANE ATPASE 106 170 - -
Psa5g3859 198 SUPERFAMILY HAD-like 108 167 IPR036412 -
Psa5g3859 198 Gene3D - 98 163 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3859 Psa-Chr5 304078242 304079695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3859 107 170 Primary Pumps ATPases AT3G47950 70.312 3.54e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3859 K01535 - psom:113281565 98.9821