Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3840 ATGCTTTCTCTTCCACCACCTCCTCCTTTGCATCCAACCACAAATGAAACCAAACAAGTCCCTCTAGACCAAATTGTCATATCAAATGAAGCAAATTTTCCAACCACAACAAAGTTAAGAAGGCCACCAAATCTAAGACAACTTAGGTTTCAAAGAACCAATCCAATAATATGGTTTGGAGCAATATTGTGTCTCATATTCAGCCTTGTACTAATTTTCTTTGGTGTCACAACTTTGATAATCTTCTTAGCCATCAAACCGAAAAACCCTACATTTGACATACCTAATGCGAATCTCAATCTTGTATACTTTGACTCACCTCAATATTTCAATGGTGACTTCACACTCCTTGCAAATTTCACTAACCCCAACACCAAAATTGATGTGAGTTTTGAGTCATTAGACGTAGAGCTTTTCTTTTCAGATGCGATCATATCAGCACAGTCGATTCAGCCTTTTACTGAAAGGAAGAAGGAAAGTAGGTTGCAATCATTGAACTTTATATCAAGCTTGGTGTTCTTGCCTAAGGATCTTGGTGTGAAACTTCAAAGGCAAGTGGAGAGTAACCAGATTGTTTACAATGTAAGAGGAACATTTAAAGTTAGAGTGAATTTGGGACTTTTTCATTTGTCTTATTTGTTGCATAGTAGATGTCAGATGGTGTTGACTAGTCCACCAAGTGGTGTCTTAGTAGCAAGAAAGTGCATCACAAAGAGATGA 720 0.375 MLSLPPPPPLHPTTNETKQVPLDQIVISNEANFPTTTKLRRPPNLRQLRFQRTNPIIWFGAILCLIFSLVLIFFGVTTLIIFLAIKPKNPTFDIPNANLNLVYFDSPQYFNGDFTLLANFTNPNTKIDVSFESLDVELFFSDAIISAQSIQPFTERKKESRLQSLNFISSLVFLPKDLGVKLQRQVESNQIVYNVRGTFKVRVNLGLFHLSYLLHSRCQMVLTSPPSGVLVARKCITKR* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3840 239 Pfam Late embryogenesis abundant protein 121 204 IPR004864 -
Psa5g3840 239 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 33 239 - -
Psa5g3840 239 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 33 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3840 Psa-Chr5 301969610 301970329 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3840 - - gmx:100803431 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3840 5 301969610 301970329 Psa5g3840 5 301969610 301970329 ECH
Psa5g3840 5 301969610 301970329 Psa2g0133 2 5085234 5086631 PCT