Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3839 ATGGGTGGTGCTAAGTCAGCTGTTGATTTAATGGAATCTTCATCTGAAGTTCATTTTTCTGGATTTCACACAGATGGTTTTGAGCAAAGAGAAGCTAGCATAGAACAACCAACAACATCAGCAACCGAAATGTACAATCAACCTTTCGTCATAGGTGTTGCTGGAGGTGCGGCATCTGGCAAAAAAACAGTTTGTGATATGATTGTTCAGCAGCTTCATGACCAACGAGTTGTGCTTGTTAATCAGGATTCTTTTTACAATAACCTGAGTGAGGAGGAACGATCAAGGGTACAAGATTACAACTTTGACCATCCTGATGCTTTTGATACCGGGGAATTGCTTCGTGTTATGGACAAATTGAAGCACGGTGAAGCTGTAGATATTCCAAAGTATGATTTTAAGAGTTACAAAACTGACACGTTAAGAAGGGTGAACCCTTCAGATGTTATAATTTTGGAAGGCATCCTTGTTTTCCATGATCCACGTGTTAGGGAGTTGATGAATATGAAGATATTTGTTGATACAGATGCTGATGTTCGTTTGGCAAGAAGGATTAGGCGTGATACCAGCGAGAAGGATCGGGACATTGGAGTGATTCTTGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAGAAGTATGCTGATATAATCATACCTCGTGGAGGAGATAATCATGTGGCTATTGATTTGATTGTTCAGCATATCCGCACAAAGCTTGGTCAGCATGACCTTTGTAAAATATATCCGAATTTATATGTCATTCAGTCGACATTTCAGATACGCGGTATGCATACCTTGATACGTGATGCTCAGATAACGAAGCATGATTTTGTATTTTATTCTGATCGTTTGATTCGTTTGGTCGTAGAACATGGTTTAGGACATCTTCCATTTACAGAAAAACAAGTAATCACTCCCACAGGTTCTGTTTACACTGGTGTGGATTTTTGCAAAAGGTTGTGTGGTGTCTCTGTCATCAGAAGTGGGGAGAGTATGGAGAATGCCTTAAGAGCATGCTGTAAAGGTATTAAGATTGGAAAAATTCTGATCCACAGAGAAGGCGACAATGGTGAACAGCTAATATATGAAAAATTGCCAAACGACATCTCAGAAAGGCATGTGTTACTATTGGACCCTATTCTCGGCACAGGTAATTCGGCTGTTCATGCAATTTCTTTACTTATAAGAAAGGGTGTGCCAGAATCCAACATTATATTTCTTAATCTCATCTCTGCTCCTAAAGGGGTTCACGTGGTCTGCAAAAGTTTTCCAAGAATTAAAATAGTGACATCTGAGATAGAGATTGGTTTGAATGAAGATTTCCGTGTCATACCGGGAATGGGCGAGTTTGGAGATCGGTACTTTGGAACAGATGATGATGATGAACAAGTGGTGGTTGCTTCACAGAAGTGA 1437 0.3967 MGGAKSAVDLMESSSEVHFSGFHTDGFEQREASIEQPTTSATEMYNQPFVIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLSEEERSRVQDYNFDHPDAFDTGELLRVMDKLKHGEAVDIPKYDFKSYKTDTLRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGVILDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAIDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGEQLIYEKLPNDISERHVLLLDPILGTGNSAVHAISLLIRKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDDEQVVVASQK* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3839 478 CDD UMPK 50 246 IPR000764 -
Psa5g3839 478 PANTHER URIDINE KINASE 16 468 - -
Psa5g3839 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 239 IPR027417 -
Psa5g3839 478 TIGRFAM udk: uridine kinase 47 246 IPR000764 -
Psa5g3839 478 PANTHER URIDINE KINASE 16 468 - -
Psa5g3839 478 Pfam Phosphoribulokinase / Uridine kinase family 50 234 IPR006083 GO:0005524|GO:0016301
Psa5g3839 478 SUPERFAMILY PRTase-like 249 466 IPR029057 -
Psa5g3839 478 Gene3D - 250 465 IPR029057 -
Psa5g3839 478 Pfam Uracil phosphoribosyltransferase 264 465 - -
Psa5g3839 478 Gene3D - 45 249 IPR027417 -
Psa5g3839 478 CDD PRTases_typeI 323 438 IPR000836 -
Psa5g3839 478 PRINTS Uridine kinase signature 48 65 - -
Psa5g3839 478 PRINTS Uridine kinase signature 78 89 - -
Psa5g3839 478 PRINTS Uridine kinase signature 123 138 - -
Psa5g3839 478 PRINTS Uridine kinase signature 178 188 - -
Psa5g3839 478 PRINTS Uridine kinase signature 192 203 - -
Psa5g3839 478 PRINTS Uridine kinase signature 214 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3839 Psa-Chr5 301968963 301976946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g3839 3 468 PRT Gene Family AT4G26510 83.547 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3839 K00876 - gmx:100792258 890.567