Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3833 ATGAAAAGACCACGAAAATCAAAGAAAAGGGGTTGCAAGAAACAATGGATTACTGAGTATTATCAACAAGAAGAAAAAGTAGAAGACGAAAGAGAGTTTTCAAAATGGGTCGCAGATTATTGTAGTGATCATCAAATACTTTTGGTGGGTGATGGTGATTTCTCATTCTCCCTTTCCCTCGCTAAAGCTTTTGCTTCTGCTTCAAACATTGTTGTTTCTTCTCTCGACACATATGGCTTTCACGGGAAGGAAGATAACTTGATGATGATCAAGATGCATGTGGATCTTGTGTTTGGTTTCTTCAAGAATGCAAGTTACATGTTTAGGATCAATGGTGAAGTTCATGTCAATCACAAAACTACTCCCCCTTTTGATACTTGGAACATAGAGAAGCTCGCCGAGCAAAGCTTTCTGATGATGATCGAGTGTGCTGATTTCAAGCAAGAAGCTTATCCAGGTTATAACAATAAGAGAGGTCATAGATCTCGATGCGATGACCCATTTCCTCTCGACAAGTATCTTTCCAAAAACAGATGTCTCGATCATTATTGTCAGAGAAATCTCTTTCCAAAAAGGAATGAACCAATGAGATCAGAATTTGACTTGAGAAATGGATACCATACAATCACAAACAACGTGACAGAAATACATGAAAGAGTTGCTTCTTCTGCTGATTATTATCGTTATGCTCGCGATACGACACAGGACATTAAAAGATTGCTACAACCACCAATGCAGTCAAGTTACAACCAATTTTCACATAACTGGCCGATACCAACTAATTGTAGACTTTGTTTGACAGAACACCATAGAAGAACAATGGATGTTTCTCCTTCCATGCCACTTGGTGCTAGAAATGATGGCTACCACCAATATCAACAAGTATTAGAAAGAAGCTCAACATATTTGCAAGAAGAACTTTATCGAAATGCTCAGAGGTCAAGTGATTGTTATGATATAGCAAGGCATGACTTGGAGCGTACAATGCTGAAGTGCTTAGGAGAGATTTTAGTAGAGAAATCTATATTATGCAATGAGTGTGTTCATGCTACATTGAAGGATGATATCTTGTTAACTACTATAGCTAGATGGAGTTGTGAAACTGGTAATTTTGTAATCAACATTTAG 1128 0.3768 MKRPRKSKKRGCKKQWITEYYQQEEKVEDEREFSKWVADYCSDHQILLVGDGDFSFSLSLAKAFASASNIVVSSLDTYGFHGKEDNLMMIKMHVDLVFGFFKNASYMFRINGEVHVNHKTTPPFDTWNIEKLAEQSFLMMIECADFKQEAYPGYNNKRGHRSRCDDPFPLDKYLSKNRCLDHYCQRNLFPKRNEPMRSEFDLRNGYHTITNNVTEIHERVASSADYYRYARDTTQDIKRLLQPPMQSSYNQFSHNWPIPTNCRLCLTEHHRRTMDVSPSMPLGARNDGYHQYQQVLERSSTYLQEELYRNAQRSSDCYDIARHDLERTMLKCLGEILVEKSILCNECVHATLKDDILLTTIARWSCETGNFVINI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3833 375 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 85 158 IPR019446 GO:0070042|GO:0070475
Psa5g3833 375 PANTHER PHENYLALANYL-TRNA SYNTHETASE 32 79 - -
Psa5g3833 375 PANTHER PHENYLALANYL-TRNA SYNTHETASE 79 171 - -
Psa5g3833 375 PANTHER BNAC06G26310D PROTEIN 79 171 - -
Psa5g3833 375 PANTHER BNAC06G26310D PROTEIN 32 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3833 Psa-Chr5 301817611 301820105 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3833 - - mtr:MTR_3g061070 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3833 5 301817611 301820105 Psa5g3833 5 301817611 301820105 ECH