Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g3832 ATGAGTGATTCTCTTTACAAAGTTGATACAACACCACGTCTTGCTCAATGGAGAATCGAAAACTTGGCTTCTTGCAGTTATCGCAAATCAGATCCTTTCAAGATTGGAAACTGGAACTGGTATTTGTCGGTGGAGAAACACAAGGTTGTGTTTGTTAAATTGTTTCCTGAAATATCCAATGTCACAAGAGACAATCCTCCAATTGCATCTTTTATCATGCGTGTGATTAGTTCTGCTCTTGGAGATCGCAAAGCTCTCACACATCCAGAGATAAAGGACAAAGTGATCAAGAGCAACGAGGATTTTGTTTGGTCACTTGAGGTTCCACTGTCTGGAAAATTCATCATTGATGTTGATTTCCTTGATTTGAAGATTGCATCCCCAGATGGTGGAGAACCATGCTCTATATGGGGTGGTGAAGGATTTACGCAAGAGAGATCGAATGCAAAAGCGCTAGGGTCGCTTGGTAAAATGCTAAGAAAAGGAATCCACACGGACATAACCATCAATGCTTCTGATGGAAGTATAGGAGTTCATAGAGCTGTTCTCGCATCTCGATCACCTGTCTTCCAAAGCATGTTCTCGCATGATCTTAAAGAGAAAGAGTTGTCGACCATAAACATCACAGACATGTCAATCGAAACATGTCAGGCTTTTTTCAACTATCTTTACGGGATCATCAAAAACGAAGAATTTCTGACTCATAGGCTGGCCCTTCTACACGCAGCTGATAAGTACGACATATCTGATTTGAGAGAGGCCATCCACGAGAGTCTTCTTGAAGATATTGATACGAAGAATGTACTCGAGAGGCTCCAAAACGCGTCGCTATATCGGTTGACGAAACTGAAGATGAGCTGCATTCAGTATCTTGTTAAATTTGGTAAAATATTCGAAATTCGGGATGATTTCAATACGTTCCTCCAAAATGCAGACAGGGATCTCATTTCTGAAGTCTTCGCCGAAGTTCTTGGAGCATGGAAAGGATATTGA 993 0.4129 MSDSLYKVDTTPRLAQWRIENLASCSYRKSDPFKIGNWNWYLSVEKHKVVFVKLFPEISNVTRDNPPIASFIMRVISSALGDRKALTHPEIKDKVIKSNEDFVWSLEVPLSGKFIIDVDFLDLKIASPDGGEPCSIWGGEGFTQERSNAKALGSLGKMLRKGIHTDITINASDGSIGVHRAVLASRSPVFQSMFSHDLKEKELSTINITDMSIETCQAFFNYLYGIIKNEEFLTHRLALLHAADKYDISDLREAIHESLLEDIDTKNVLERLQNASLYRLTKLKMSCIQYLVKFGKIFEIRDDFNTFLQNADRDLISEVFAEVLGAWKGY* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g3832 330 Pfam BTB/POZ domain 157 261 IPR000210 GO:0005515
Psa5g3832 330 SMART BTB_4 165 263 IPR000210 GO:0005515
Psa5g3832 330 ProSiteProfiles BTB domain profile. 165 224 IPR000210 GO:0005515
Psa5g3832 330 Gene3D Potassium Channel Kv1.1; Chain A 143 293 IPR011333 -
Psa5g3832 330 CDD BTB_POZ_ZBTB_KLHL-like 164 246 - -
Psa5g3832 330 SUPERFAMILY POZ domain 150 261 IPR011333 -
Psa5g3832 330 PANTHER OS08G0495500 PROTEIN-RELATED 1 330 IPR044714 -
Psa5g3832 330 PANTHER OS08G0495500 PROTEIN 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g3832 Psa-Chr5 301755625 301758367 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Psa5g3832 BTB 7e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g3832 K10523 - gmx:100790186 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g3832 5 301755625 301758367 Psa5g3832 5 301755625 301758367 ECH
Psa5g3832 5 301755625 301758367 Psa2g1373 2 103930291 103933469 PCT